AT4G27960 (UBC9)

Aliases : UBC9

Description : ubiquitin conjugating enzyme 9

Gene families : OG0000200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G27960

Target	Alias	Description	ECC score	Gene Family Method
Adi_g017977	UBC30	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g029541	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g02992	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Als_g06017	ATUBC11, UBC11	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.04	OrthoFinder output from all 47 species
Als_g06450	UBC9	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g43928	ATUBC11, UBC11	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g06516	EMB144, CIN4, COP10, FUS9	component *(COP10) of CDDD substrate adaptor module of...	0.03	OrthoFinder output from all 47 species
Aop_g18429	ATUBC11, UBC11	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene05035.t1	ATUBC11, UBC11,...	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0096.g043744	ATUBC11, UBC11	E2 MUB ubiquitin-conjugating enzyme & original...	0.06	OrthoFinder output from all 47 species
Cba_g32592	ATUBC8, UBC8	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g71490	ATUBC11, UBC11	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.03G065800.1	UBC10, Ceric.03G065800	E2 MUB ubiquitin-conjugating enzyme & original...	0.05	OrthoFinder output from all 47 species
Dac_g19915	UBC9	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g03167	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01025872001	UBC10	Protein degradation.peptide...	0.04	OrthoFinder output from all 47 species
Gb_07393	ATUBC11, UBC11	Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Gb_19293	UBC10	conjugation E2 protein	0.05	OrthoFinder output from all 47 species
LOC_Os01g46926.1	UBC9, LOC_Os01g46926	conjugation E2 protein	0.09	OrthoFinder output from all 47 species
LOC_Os02g16040.1	UBC10, LOC_Os02g16040	conjugation E2 protein	0.02	OrthoFinder output from all 47 species
LOC_Os06g30970.1	UBC10, LOC_Os06g30970	conjugation E2 protein	0.04	OrthoFinder output from all 47 species
LOC_Os09g12230.1	ATUBC11, UBC11,...	conjugation E2 protein	0.02	OrthoFinder output from all 47 species
Lfl_g31695	ATUBC11, UBC11	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Mp5g21800.1	UBC10	conjugation E2 protein	0.03	OrthoFinder output from all 47 species
Mp7g03500.1	EMB144, CIN4, COP10, FUS9	conjugation E2 protein. E2 conjugating component COP10...	0.03	OrthoFinder output from all 47 species
Ore_g15849	ATUBC11, UBC11	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Solyc05g050230.4.1	UBC10, Solyc05g050230	Ubiquitin-conjugating enzyme E2 5A OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
Spa_g24617	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e020271_P001	UBC9, Zm00001e020271	conjugation E2 protein	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IDA	Interproscan
MF	GO:0004842	ubiquitin-protein transferase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IDA	Interproscan
BP	GO:0006511	ubiquitin-dependent protein catabolic process	TAS	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005622	intracellular anatomical structure	IEP	HCCA
MF	GO:0008047	enzyme activator activity	IEP	HCCA
CC	GO:0009532	plastid stroma	IEP	HCCA
CC	GO:0009570	chloroplast stroma	IEP	HCCA
BP	GO:0009617	response to bacterium	IEP	HCCA
BP	GO:0010496	intercellular transport	IEP	HCCA
BP	GO:0010497	plasmodesmata-mediated intercellular transport	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
BP	GO:0010647	positive regulation of cell communication	IEP	HCCA
BP	GO:0019725	cellular homeostasis	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
BP	GO:0042742	defense response to bacterium	IEP	HCCA
BP	GO:0043085	positive regulation of catalytic activity	IEP	HCCA
BP	GO:0044093	positive regulation of molecular function	IEP	HCCA
BP	GO:0045454	cell redox homeostasis	IEP	HCCA
BP	GO:0048509	regulation of meristem development	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
BP	GO:0050790	regulation of catalytic activity	IEP	HCCA
BP	GO:0065009	regulation of molecular function	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000608	UBQ-conjugat_E2	5	141

External Links

No external refs found!

AT4G27960 (UBC9)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation