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AT4G27880


Description : Protein with RING/U-box and TRAF-like domains


Gene families : OG0000462 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000462_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G27880

Target Alias Description ECC score Gene Family Method Actions
Aev_g07852 SINAT2 E3 ubiquitin ligase *(SINA) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0093.g043314 No alias not classified & original description: CDS=196-1131 0.03 OrthoFinder output from all 47 species
Smo97849 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process ISS Interproscan
BP GO:0007275 multicellular organism development ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0043069 negative regulation of programmed cell death IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0060548 negative regulation of cell death IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0080132 fatty acid alpha-hydroxylase activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR018121 7-in-absentia-prot_TRAF-dom 106 305
No external refs found!