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Aliases : RMA3, ATRMA3
Description : RING membrane-anchor 3
Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT4G27470 | |
| Cluster | HCCA: Cluster_77 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G19310 | No alias | RING/U-box superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g072154 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g094710 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g36880 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g24081 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene43423.t1 | Aspi01Gene43423 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s1126.g097855 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: CDS=1-693 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g00476 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g05289 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g13801 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g073900.4.1 | Solyc01g073900 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g03199 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IDA | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| CC | GO:0005783 | endoplasmic reticulum | IDA | Interproscan |
| MF | GO:0008270 | zinc ion binding | ISS | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0009698 | phenylpropanoid metabolic process | IEP | HCCA |
| MF | GO:0016207 | 4-coumarate-CoA ligase activity | IEP | HCCA |
| MF | GO:0016405 | CoA-ligase activity | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | HCCA |
| MF | GO:0016878 | acid-thiol ligase activity | IEP | HCCA |
| MF | GO:0019825 | oxygen binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0047631 | ADP-ribose diphosphatase activity | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR018957 | Znf_C3HC4_RING-type | 44 | 91 |
| No external refs found! |