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AT4G27390


Description : unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG0007811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G27390
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Dde_g06364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g42280.1 LOC_Os05g42280 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp6g13110.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g29744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g063530.3.1 Solyc07g063530 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e027374_P001 Zm00001e027374 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0048513 animal organ development IEP HCCA

No InterPro domains available for this sequence

No external refs found!