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  5. AT4G27130

AT4G27130


Description : Translation initiation factor SUI1 family protein


Gene families : OG0000506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000506_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G27130

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00266770 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
Als_g42596 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47733 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11451 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0015.g013936 No alias assembly factor (eIF1) of eIF1 & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.02G032700.1 Ceric.02G032700 assembly factor (eIF1) of eIF1 & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.07G005000.1 Ceric.07G005000 assembly factor (eIF1) of eIF1 & original description:... 0.03 OrthoFinder output from all 47 species
Cre06.g298100 No alias Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
Lfl_g25397 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Mp6g00710.1 No alias assembly factor (eIF1) of eIF1 0.02 OrthoFinder output from all 47 species
Msp_g00118 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37975 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g064150.4.1 Solyc07g064150 assembly factor (eIF1) of eIF1 0.05 OrthoFinder output from all 47 species
Spa_g10697 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g36010 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006413 translational initiation ISS Interproscan
BP GO:0048193 Golgi vesicle transport RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000304 response to singlet oxygen IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006301 postreplication repair IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0009910 negative regulation of flower development IEP HCCA
BP GO:0010039 response to iron ion IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016574 histone ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
CC GO:0031371 ubiquitin conjugating enzyme complex IEP HCCA
CC GO:0031372 UBC13-MMS2 complex IEP HCCA
BP GO:0033523 histone H2B ubiquitination IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034599 cellular response to oxidative stress IEP HCCA
BP GO:0034614 cellular response to reactive oxygen species IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0048581 negative regulation of post-embryonic development IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051093 negative regulation of developmental process IEP HCCA
BP GO:0051241 negative regulation of multicellular organismal process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0062197 cellular response to chemical stress IEP HCCA
BP GO:0071452 cellular response to singlet oxygen IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
BP GO:1901701 cellular response to oxygen-containing compound IEP HCCA
BP GO:2000242 negative regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR001950 SUI1 28 101
No external refs found!