AT4G26570 (CBL3, ATCBL3)

Aliases : CBL3, ATCBL3

Description : calcineurin B-like 3

Gene families : OG0000287 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000287_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G26570

Target	Alias	Description	ECC score	Gene Family Method
Ala_g01402	CBL2, ATCBL2	calcium sensor *(CBL) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g05614	CBL9, ATCBL9	calcium sensor *(CBL) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g20746	CBL9, ATCBL9	calcium sensor *(CBL) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g57726	CBL9, ATCBL9	calcium sensor *(CBL) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.1Z137800.1	CBL4, ATSOS3,...	calcium sensor *(CBL) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.34G029300.1	CBL4, ATSOS3,...	calcium sensor *(CBL) & original description:...	0.03	OrthoFinder output from all 47 species
Dcu_g01010	CBL3, ATCBL3	calcium sensor *(CBL) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g38224	CBL9, ATCBL9	calcium sensor *(CBL) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g02116	CBL9, ATCBL9	calcium sensor *(CBL) & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01014744001	CBL2, ATCBL2	Calcineurin B-like protein 3 OS=Oryza sativa subsp. japonica	0.04	OrthoFinder output from all 47 species
Ppi_g04962	CBL9, ATCBL9	calcium sensor *(CBL) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021307	CBL2, ATCBL2	calcium sensor *(CBL) & original description: CDS=58-729	0.03	OrthoFinder output from all 47 species
Solyc12g015870.2.1	CBL2, ATCBL2,...	Calcineurin B-like protein 3 OS=Oryza sativa subsp....	0.02	OrthoFinder output from all 47 species
Spa_g16050	CBL2, ATCBL2	calcium sensor *(CBL) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	ISS	Interproscan
BP	GO:0005513	detection of calcium ion	ISS	Interproscan
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005773	vacuole	IDA	Interproscan
CC	GO:0005774	vacuolar membrane	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009593	detection of chemical stimulus	None	Extended
CC	GO:0009705	plant-type vacuole membrane	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010118	stomatal movement	RCA	Interproscan
CC	GO:0016020	membrane	IDA	Interproscan
BP	GO:0019722	calcium-mediated signaling	RCA	Interproscan
BP	GO:0019932	second-messenger-mediated signaling	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050801	monoatomic ion homeostasis	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051592	response to calcium ion	None	Extended
BP	GO:0051606	detection of stimulus	None	Extended
BP	GO:0055065	metal ion homeostasis	None	Extended
BP	GO:0055075	potassium ion homeostasis	IMP	Interproscan
BP	GO:0055080	monoatomic cation homeostasis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
BP	GO:0098771	inorganic ion homeostasis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	HCCA
MF	GO:0004559	alpha-mannosidase activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
CC	GO:0005768	endosome	IEP	HCCA
CC	GO:0005794	Golgi apparatus	IEP	HCCA
CC	GO:0005795	Golgi stack	IEP	HCCA
CC	GO:0005802	trans-Golgi network	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0006491	N-glycan processing	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	HCCA
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	HCCA
BP	GO:0009100	glycoprotein metabolic process	IEP	HCCA
BP	GO:0010393	galacturonan metabolic process	IEP	HCCA
BP	GO:0010394	homogalacturonan metabolic process	IEP	HCCA
MF	GO:0010427	abscisic acid binding	IEP	HCCA
MF	GO:0015923	mannosidase activity	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0019840	isoprenoid binding	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
BP	GO:0030244	cellulose biosynthetic process	IEP	HCCA
MF	GO:0031406	carboxylic acid binding	IEP	HCCA
CC	GO:0031410	cytoplasmic vesicle	IEP	HCCA
CC	GO:0031982	vesicle	IEP	HCCA
CC	GO:0031984	organelle subcompartment	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0032940	secretion by cell	IEP	HCCA
MF	GO:0033293	monocarboxylic acid binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0042562	hormone binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0043177	organic acid binding	IEP	HCCA
MF	GO:0043178	alcohol binding	IEP	HCCA
BP	GO:0045488	pectin metabolic process	IEP	HCCA
BP	GO:0046903	secretion	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
MF	GO:0051020	GTPase binding	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051274	beta-glucan biosynthetic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
CC	GO:0097708	intracellular vesicle	IEP	HCCA
CC	GO:0098791	Golgi apparatus subcompartment	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002048	EF_hand_dom	122	189
IPR002048	EF_hand_dom	64	109

External Links

No external refs found!

AT4G26570 (CBL3, ATCBL3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation