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  5. AT4G26350

AT4G26350


Description : F-box/RNI-like/FBD-like domains-containing protein


Gene families : OG0004270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004270_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G26350

Target Alias Description ECC score Gene Family Method Actions
AT1G05080 No alias F-box/RNI-like/FBD-like domains-containing protein 0.11 OrthoFinder output from all 47 species
AT1G32375 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 OrthoFinder output from all 47 species
AT1G50980 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 OrthoFinder output from all 47 species
AT3G26930 No alias Protein with RNI-like/FBD-like domains 0.05 OrthoFinder output from all 47 species
AT3G49040 No alias F-box/RNI-like superfamily protein 0.07 OrthoFinder output from all 47 species
AT3G49045 No alias No description available 0.07 OrthoFinder output from all 47 species
AT3G49480 No alias Protein with RNI-like/FBD-like domains 0.05 OrthoFinder output from all 47 species
AT3G52690 No alias RNI-like superfamily protein 0.17 OrthoFinder output from all 47 species
AT4G00160 No alias F-box/RNI-like/FBD-like domains-containing protein 0.09 OrthoFinder output from all 47 species
AT4G00315 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 OrthoFinder output from all 47 species
AT4G09920 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.02 OrthoFinder output from all 47 species
AT4G10410 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
AT4G10420 No alias FBD / Leucine Rich Repeat domains containing protein 0.04 OrthoFinder output from all 47 species
AT4G15060 No alias CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596),... 0.02 OrthoFinder output from all 47 species
AT4G26340 No alias F-box/RNI-like/FBD-like domains-containing protein 0.07 OrthoFinder output from all 47 species
AT5G38565 No alias F-box/FBD-like domains containing protein 0.03 OrthoFinder output from all 47 species
AT5G38590 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 OrthoFinder output from all 47 species
AT5G40750 No alias FBD / Leucine Rich Repeat domains containing protein 0.05 OrthoFinder output from all 47 species
AT5G44850 No alias Protein with RNI-like/FBD-like domains 0.08 OrthoFinder output from all 47 species
AT5G52460 EDA41 FBD, F-box and Leucine Rich Repeat domains containing protein 0.04 OrthoFinder output from all 47 species
AT5G56325 No alias FBD-like domain family protein 0.12 OrthoFinder output from all 47 species
AT5G56370 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 OrthoFinder output from all 47 species
AT5G56400 No alias FBD, F-box, Skp2-like and Leucine Rich Repeat domains... 0.19 OrthoFinder output from all 47 species
AT5G56410 No alias Protein with RNI-like/FBD-like domains 0.04 OrthoFinder output from all 47 species
AT5G56420 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 OrthoFinder output from all 47 species
AT5G56430 No alias F-box/FBD-like domains containing protein 0.19 OrthoFinder output from all 47 species
AT5G56700 No alias FBD / Leucine Rich Repeat domains containing protein 0.03 OrthoFinder output from all 47 species
AT5G56810 No alias F-box/RNI-like/FBD-like domains-containing protein 0.08 OrthoFinder output from all 47 species
AT5G56820 No alias F-box/RNI-like/FBD-like domains-containing protein 0.02 OrthoFinder output from all 47 species
AT5G60610 No alias F-box/RNI-like superfamily protein 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0015114 phosphate ion transmembrane transporter activity IEP HCCA
BP GO:0015858 nucleoside transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0018126 protein hydroxylation IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEP HCCA
BP GO:0019511 peptidyl-proline hydroxylation IEP HCCA
CC GO:0022625 cytosolic large ribosomal subunit IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 4 41
IPR013101 Leu-rich_rpt_2 151 175
IPR006566 FBD 352 393
No external refs found!