AT4G26230

Description : Ribosomal protein L31e family protein

Gene families : OG0000630 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000630_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G26230
Cluster	HCCA: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00233860	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.05	OrthoFinder output from all 47 species
Aob_g07507	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Aop_g33204	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Azfi_s0108.g045264	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020703.20	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
Cre12.g489153	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.05	OrthoFinder output from all 47 species
GSVIVT01015251001	No alias	60S ribosomal protein L31 OS=Nicotiana glutinosa	0.05	OrthoFinder output from all 47 species
GSVIVT01032061001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
Lfl_g18251	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Mp7g18320.1	No alias	component RPL31 of LSU proteome component	0.06	OrthoFinder output from all 47 species
Pir_g42240	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Pir_g49678	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Pir_g58363	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Pp3c10_8090V3.1	Pp3c10_8090	Ribosomal protein L31e family protein	0.02	OrthoFinder output from all 47 species
Pp3c14_7550V3.1	Pp3c14_7550	Ribosomal protein L31e family protein	0.02	OrthoFinder output from all 47 species
Pp3c1_34390V3.1	Pp3c1_34390	Ribosomal protein L31e family protein	0.02	OrthoFinder output from all 47 species
Pp3c25_8980V3.1	Pp3c25_8980	Ribosomal protein L31e family protein	0.05	OrthoFinder output from all 47 species
Pp3c2_16490V3.1	Pp3c2_16490	Ribosomal protein L31e family protein	0.04	OrthoFinder output from all 47 species
Sam_g36402	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Smo268515	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Solyc05g008010.3.1	Solyc05g008010	component RPL31 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Solyc12g008720.2.1	Solyc12g008720	component RPL31 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Spa_g23525	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Tin_g25963	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Zm00001e003520_P001	Zm00001e003520	component RPL31 of LSU proteome component	0.07	OrthoFinder output from all 47 species
Zm00001e023413_P001	Zm00001e023413	component RPL31 of LSU proteome component	0.07	OrthoFinder output from all 47 species
Zm00001e036927_P001	Zm00001e036927	component RPL31 of LSU proteome component	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	ISS	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005840	ribosome	ISS	Interproscan
BP	GO:0006412	translation	ISS	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0015934	large ribosomal subunit	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0022613	ribonucleoprotein complex biogenesis	None	Extended
CC	GO:0022625	cytosolic large ribosomal subunit	IDA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0042254	ribosome biogenesis	ISS	Interproscan
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044391	ribosomal subunit	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005730	nucleolus	IEP	HCCA
BP	GO:0019932	second-messenger-mediated signaling	IEP	HCCA
CC	GO:0022626	cytosolic ribosome	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000054	Ribosomal_L31e	10	91

External Links

No external refs found!

AT4G26230

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation