AT4G25830

Description : Uncharacterised protein family (UPF0497)

Gene families : OG0000811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G25830
Cluster	HCCA: Cluster_128

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00028p00153320	evm_27.TU.AmTr_v1...	CASP-like protein 2B1 OS=Vitis vinifera	0.03	OrthoFinder output from all 47 species
AMTR_s00037p00155660	evm_27.TU.AmTr_v1...	CASP-like protein 2D1 OS=Vitis vinifera	0.05	OrthoFinder output from all 47 species
Adi_g005547	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene18889.t1	Aspi01Gene18889	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene18890.t1	Aspi01Gene18890	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.08G055900.1	Ceric.08G055900	not classified & original description: pacid=50637769...	0.03	OrthoFinder output from all 47 species
Ceric.11G056300.1	Ceric.11G056300	not classified & original description: pacid=50596699...	0.03	OrthoFinder output from all 47 species
Dac_g45230	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g04283	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01029179001	No alias	CASP-like protein 2C1 OS=Vitis vinifera	0.03	OrthoFinder output from all 47 species
LOC_Os06g44610.1	LOC_Os06g44610	CASP-like protein 2C1 OS=Oryza sativa subsp. japonica...	0.05	OrthoFinder output from all 47 species
Len_g15691	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g30725	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g35653	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g07753	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g12934	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g24648	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo75865	No alias	CASP-like protein 2U3 OS=Selaginella moellendorffii	0.03	OrthoFinder output from all 47 species
Spa_g00241	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g16154	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003954	NADH dehydrogenase activity	None	Extended
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
CC	GO:0005747	mitochondrial respiratory chain complex I	IBA	Interproscan
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IBA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0009055	electron transfer activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	None	Extended
BP	GO:0015980	energy derivation by oxidation of organic compounds	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	None	Extended
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
CC	GO:0030964	NADH dehydrogenase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0045271	respiratory chain complex I	None	Extended
BP	GO:0045333	cellular respiration	IBA	Interproscan
MF	GO:0050136	NADH dehydrogenase (quinone) activity	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098798	mitochondrial protein-containing complex	None	Extended
CC	GO:0098800	inner mitochondrial membrane protein complex	None	Extended
CC	GO:0098803	respiratory chain complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1902495	transmembrane transporter complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended
CC	GO:1990351	transporter complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	IEP	HCCA
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
MF	GO:0004497	monooxygenase activity	IEP	HCCA
CC	GO:0005618	cell wall	IEP	HCCA
BP	GO:0006949	syncytium formation	IEP	HCCA
CC	GO:0009505	plant-type cell wall	IEP	HCCA
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	HCCA
BP	GO:0009808	lignin metabolic process	IEP	HCCA
BP	GO:0009809	lignin biosynthetic process	IEP	HCCA
BP	GO:0009812	flavonoid metabolic process	IEP	HCCA
BP	GO:0009813	flavonoid biosynthetic process	IEP	HCCA
BP	GO:0010048	vernalization response	IEP	HCCA
BP	GO:0010224	response to UV-B	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016621	cinnamoyl-CoA reductase activity	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
MF	GO:0050113	inositol oxygenase activity	IEP	HCCA
MF	GO:0060089	molecular transducer activity	IEP	HCCA
BP	GO:0080167	response to karrikin	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006702	CASP_dom	3	146

External Links

No external refs found!

AT4G25830

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation