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  5. AT4G25750

AT4G25750


Description : ABC-2 type transporter family protein


Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G25750
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00181450 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AMTR_s00031p00236610 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
AMTR_s00060p00208620 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.04 OrthoFinder output from all 47 species
AT2G13610 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
AT3G55090 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
AT5G19410 No alias ABC-2 type transporter family protein 0.07 OrthoFinder output from all 47 species
AT5G52860 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
Als_g14907 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36964 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37274 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene05499.t1 Aspi01Gene05499 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000828 No alias subfamily ABCG transporter & original description: CDS=1-2274 0.03 OrthoFinder output from all 47 species
Azfi_s0014.g013525 No alias subfamily ABCG transporter & original description: CDS=189-2225 0.03 OrthoFinder output from all 47 species
Cba_g03340 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G055400.1 Ceric.14G055400 subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g34793 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g38683 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g04073 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g25458 WBC19, ATWBC19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g25490 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g28101 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014222001 No alias ABC transporter G family member 10 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01022346001 No alias ABC transporter G family member 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01028809001 No alias Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
GSVIVT01037274001 No alias Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Gb_20468 No alias subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Gb_24085 No alias subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
LOC_Os01g42900.1 LOC_Os01g42900 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os01g61940.1 LOC_Os01g61940 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os03g17350.1 LOC_Os03g17350 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os06g30730.1 LOC_Os06g30730 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Len_g50392 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39649 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g07990.1 No alias subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Mp5g05620.1 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp5g15770.1 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Msp_g13417 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g23417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35579 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g39182 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g43887 WBC19, ATWBC19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37386 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26286 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g61308 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c8_17020V3.1 Pp3c8_17020 ABC-2 type transporter family protein 0.02 OrthoFinder output from all 47 species
Ppi_g31857 No alias subfamily ABCG transporter & original description: none 0.06 OrthoFinder output from all 47 species
Smo88976 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc03g007690.1.1 Solyc03g007690 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Solyc03g113690.1.1 Solyc03g113690 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Solyc04g010210.1.1 Solyc04g010210 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc05g056470.1.1 Solyc05g056470 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Spa_g10980 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29782 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g37465 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g41222 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g40098 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001269_P001 Zm00001e001269 subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Zm00001e020697_P001 Zm00001e020697 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e031556_P001 Zm00001e031556 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e036158_P002 Zm00001e036158 subfamily ABCG transporter 0.06 OrthoFinder output from all 47 species
Zm00001e042020_P001 Zm00001e042020 ABC transporter G family member 5 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0042626 ATPase-coupled transmembrane transporter activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
CC GO:0009504 cell plate IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
CC GO:0012505 endomembrane system IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 300 509
IPR003439 ABC_transporter-like_ATP-bd 31 175
No external refs found!