- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : hydroxyproline-rich glycoprotein family protein
Gene families : OG0002200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002200_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT4G25620 | |
| Cluster | HCCA: Cluster_6 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ala_g08047 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g05839 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.24G040300.1 | Ceric.24G040300 | not classified & original description: pacid=50628718... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_09977 | No alias | Uncharacterized protein At1g76660 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g10040.1 | No alias | Uncharacterized protein At1g76660 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g13096 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g45614 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0003.g001845 | No alias | not classified & original description: CDS=1-1476 | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005886 | plasma membrane | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0002020 | protease binding | IEP | HCCA |
| MF | GO:0004712 | protein serine/threonine/tyrosine kinase activity | IEP | HCCA |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
| BP | GO:0006006 | glucose metabolic process | IEP | HCCA |
| BP | GO:0006007 | glucose catabolic process | IEP | HCCA |
| BP | GO:0010374 | stomatal complex development | IEP | HCCA |
| BP | GO:0010375 | stomatal complex patterning | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| CC | GO:0016363 | nuclear matrix | IEP | HCCA |
| BP | GO:0019318 | hexose metabolic process | IEP | HCCA |
| BP | GO:0019320 | hexose catabolic process | IEP | HCCA |
| BP | GO:0046365 | monosaccharide catabolic process | IEP | HCCA |
| BP | GO:0048438 | floral whorl development | IEP | HCCA |
| BP | GO:0048467 | gynoecium development | IEP | HCCA |
| BP | GO:0051645 | Golgi localization | IEP | HCCA |
| BP | GO:0051646 | mitochondrion localization | IEP | HCCA |
| BP | GO:0060151 | peroxisome localization | IEP | HCCA |
| BP | GO:0090558 | plant epidermis development | IEP | HCCA |
| BP | GO:2000038 | regulation of stomatal complex development | IEP | HCCA |
| BP | GO:2000122 | negative regulation of stomatal complex development | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |