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  5. AT4G25515

AT4G25515 (SLK3)


Aliases : SLK3

Description : SEUSS-like 3


Gene families : OG0000747 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000747_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G25515

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00119460 SLK2,... Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Adi_g042651 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Adi_g049834 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Adi_g059791 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Adi_g081615 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Adi_g086246 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Adi_g086260 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Adi_g116252 SLK2 adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Adi_g117115 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Ala_g02698 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Aspi01Gene39070.t1 SEU, Aspi01Gene39070 adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Aspi01Gene51627.t1 SEU, Aspi01Gene51627 adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Ceric.03G041400.1 SEU, Ceric.03G041400 adapter component *(SEU/SLK) of transcriptional... 0.06 OrthoFinder output from all 47 species
Ceric.33G002300.1 SEU, Ceric.33G002300 adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Ceric.33G034400.1 SEU, Ceric.33G034400 adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
GSVIVT01010616001 SLK2 Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_04218 SEU Transcriptional corepressor SEUSS OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g26300 SLK2 adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Len_g41806 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Len_g54497 SEU adapter component *(SEU/SLK) of transcriptional... 0.04 OrthoFinder output from all 47 species
Lfl_g05019 SEU adapter component *(SEU/SLK) of transcriptional... 0.04 OrthoFinder output from all 47 species
Lfl_g06246 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Nbi_g05889 SEU adapter component *(SEU/SLK) of transcriptional... 0.05 OrthoFinder output from all 47 species
Ore_g15709 SEU adapter component *(SEU/SLK) of transcriptional... 0.04 OrthoFinder output from all 47 species
Ore_g42762 SEU adapter component *(SEU/SLK) of transcriptional... 0.04 OrthoFinder output from all 47 species
Pnu_g18827 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Ppi_g04706 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0143.g022883 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Sam_g19598 No alias adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Solyc03g026190.3.1 SLK2, Solyc03g026190 Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc06g059750.3.1 SEU, Solyc06g059750 Transcriptional corepressor SEUSS OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc06g059760.3.1 SEU, Solyc06g059760 Transcriptional corepressor SEUSS OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g16513 SEU adapter component *(SEU/SLK) of transcriptional... 0.04 OrthoFinder output from all 47 species
Spa_g52444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54952 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Tin_g08157 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Zm00001e021381_P001 SEU, Zm00001e021381 Transcriptional corepressor SEUSS OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR029005 LIM-bd/SEUSS 164 424
No external refs found!