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  5. AT4G25260

AT4G25260


Description : Plant invertase/pectin methylesterase inhibitor superfamily protein


Gene families : OG0000683 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000683_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G25260
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00034p00240210 evm_27.TU.AmTr_v1... Pectinesterase inhibitor 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G70720 No alias Plant invertase/pectin methylesterase inhibitor... 0.04 OrthoFinder output from all 47 species
AT4G00080 UNE11 Plant invertase/pectin methylesterase inhibitor... 0.06 OrthoFinder output from all 47 species
AT4G25250 No alias Plant invertase/pectin methylesterase inhibitor... 0.04 OrthoFinder output from all 47 species
AT5G51520 No alias Plant invertase/pectin methylesterase inhibitor... 0.04 OrthoFinder output from all 47 species
AT5G62330 No alias BEST Arabidopsis thaliana protein match is: Plant... 0.05 OrthoFinder output from all 47 species
AT5G62340 No alias Plant invertase/pectin methylesterase inhibitor... 0.07 OrthoFinder output from all 47 species
Ala_g10951 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g34997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10108.t1 Aspi01Gene10108 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40527.t1 Aspi01Gene40527 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42840.t1 Aspi01Gene42840 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g53230 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g77464 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G089900.1 Ceric.07G089900 not classified & original description: pacid=50626702... 0.02 OrthoFinder output from all 47 species
Dac_g19898 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03275 PME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08302 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018598001 No alias 21 kDa protein OS=Daucus carota 0.03 OrthoFinder output from all 47 species
LOC_Os10g10620.1 LOC_Os10g10620 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g15679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430480g0010 No alias Probable pectinesterase/pectinesterase inhibitor 34... 0.03 OrthoFinder output from all 47 species
MA_190437g0010 No alias Pectinesterase inhibitor 9 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_5786376g0010 No alias Pectinesterase inhibitor 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_9171445g0010 No alias Pectinesterase inhibitor 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g17216 PME26, ATPMEPCRC, ATPME26 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g21506 No alias pectin methylesterase inhibitor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g26981 No alias pectin methylesterase inhibitor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g083730.1.1 Solyc03g083730 21 kDa protein OS=Daucus carota (sp|p17407|21kd_dauca : 130.0) 0.04 OrthoFinder output from all 47 species
Solyc06g034370.1.1 Solyc06g034370 21 kDa protein OS=Daucus carota (sp|p17407|21kd_dauca : 189.0) 0.05 OrthoFinder output from all 47 species
Spa_g13182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002428_P001 Zm00001e002428 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e013251_P001 Zm00001e013251 Pectinesterase inhibitor 9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e030193_P001 Zm00001e030193 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e040484_P001 Zm00001e040484 Pectinesterase inhibitor 9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009641 shade avoidance IEP Interproscan
MF GO:0046910 pectinesterase inhibitor activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009685 gibberellin metabolic process IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015804 neutral amino acid transport IEP HCCA
BP GO:0015824 proline transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016101 diterpenoid metabolic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
MF GO:0045543 gibberellin 2-beta-dioxygenase activity IEP HCCA
BP GO:0046482 para-aminobenzoic acid metabolic process IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 37 193
No external refs found!