AT4G23670

Description : Polyketide cyclase/dehydrase and lipid transport superfamily protein

Gene families : OG0002483 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002483_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G23670

Target	Alias	Description	ECC score	Gene Family Method
AT1G14930	No alias	Polyketide cyclase/dehydrase and lipid transport...	0.04	OrthoFinder output from all 47 species
AT1G14940	No alias	Polyketide cyclase/dehydrase and lipid transport...	0.04	OrthoFinder output from all 47 species
AT1G14950	No alias	Polyketide cyclase/dehydrase and lipid transport...	0.04	OrthoFinder output from all 47 species
AT1G23120	No alias	Polyketide cyclase/dehydrase and lipid transport...	0.07	OrthoFinder output from all 47 species
AT1G70840	MLP31	MLP-like protein 31	0.04	OrthoFinder output from all 47 species
AT1G70850	MLP34	MLP-like protein 34	0.05	OrthoFinder output from all 47 species
AT2G01520	MLP328	MLP-like protein 328	0.05	OrthoFinder output from all 47 species
AT4G23680	No alias	Polyketide cyclase/dehydrase and lipid transport...	0.03	OrthoFinder output from all 47 species
Cba_g30056	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01011728001	MLP43	MLP-like protein 43 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Pir_g25905	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc04g007680.4.1	Solyc04g007680	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Solyc04g007750.4.1	MLP31, Solyc04g007750	Kirola OS=Actinidia deliciosa (sp\|p85524\|kiro_actde : 117.0)	0.04	OrthoFinder output from all 47 species
Solyc04g007825.2.1	Solyc04g007825	Kirola OS=Actinidia deliciosa (sp\|p85524\|kiro_actde : 95.9)	0.02	OrthoFinder output from all 47 species
Solyc04g150104.1.1	MLP34, Solyc04g150104	MLP-like protein 28 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Solyc07g008710.3.1	MLP165, Solyc07g008710	Kirola OS=Actinidia deliciosa (sp\|p85524\|kiro_actde : 108.0)	0.02	OrthoFinder output from all 47 species
Solyc09g005400.3.1	MLP168, Solyc09g005400	Kirola OS=Actinidia deliciosa (sp\|p85524\|kiro_actde : 114.0)	0.04	OrthoFinder output from all 47 species
Solyc09g005420.4.1	MLP168, Solyc09g005420	Kirola OS=Actinidia deliciosa (sp\|p85524\|kiro_actde : 113.0)	0.03	OrthoFinder output from all 47 species
Solyc09g005425.1.1	MLP34, Solyc09g005425	MLP-like protein 28 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Solyc09g005500.3.1	MLP34, Solyc09g005500	MLP-like protein 28 OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species
Solyc09g014525.1.1	MLP168, Solyc09g014525	MLP-like protein 31 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	None	Extended
BP	GO:0000097	sulfur amino acid biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005507	copper ion binding	IDA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005773	vacuole	IDA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006534	cysteine metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006833	water transport	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006970	response to osmotic stress	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009069	serine family amino acid metabolic process	None	Extended
BP	GO:0009070	serine family amino acid biosynthetic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IEP	Interproscan
BP	GO:0009651	response to salt stress	RCA	Interproscan
BP	GO:0009743	response to carbohydrate	None	Extended
BP	GO:0009746	response to hexose	None	Extended
BP	GO:0009750	response to fructose	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0019344	cysteine biosynthetic process	RCA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0034284	response to monosaccharide	None	Extended
BP	GO:0042044	fluid transport	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042742	defense response to bacterium	IEP	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046686	response to cadmium ion	IEP	Interproscan
BP	GO:0046686	response to cadmium ion	RCA	Interproscan
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004601	peroxidase activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
MF	GO:0008172	S-methyltransferase activity	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	HCCA
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	HCCA
MF	GO:0018708	thiol S-methyltransferase activity	IEP	HCCA
BP	GO:0019748	secondary metabolic process	IEP	HCCA
BP	GO:0019757	glycosinolate metabolic process	IEP	HCCA
BP	GO:0019759	glycosinolate catabolic process	IEP	HCCA
BP	GO:0019760	glucosinolate metabolic process	IEP	HCCA
BP	GO:0019762	glucosinolate catabolic process	IEP	HCCA
MF	GO:0033946	xyloglucan-specific endo-beta-1,4-glucanase activity	IEP	HCCA
BP	GO:0042546	cell wall biogenesis	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044273	sulfur compound catabolic process	IEP	HCCA
BP	GO:0050898	nitrile metabolic process	IEP	HCCA
MF	GO:0052736	beta-glucanase activity	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0080027	response to herbivore	IEP	HCCA
BP	GO:0080028	nitrile biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000916	Bet_v_I/MLP	2	150

External Links

No external refs found!

AT4G23670

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation