AT4G23450 (AtAIRP1, AIRP1)

Aliases : AtAIRP1, AIRP1

Description : RING/U-box superfamily protein

Gene families : OG0000856 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000856_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G23450
Cluster	HCCA: Cluster_63

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00047p00177970	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.01	OrthoFinder output from all 47 species
AT1G69085	No alias	No description available	0.03	OrthoFinder output from all 47 species
Azfi_s0006.g009752	No alias	E3 ubiquitin ligase *(AIRP1) & original description: CDS=1-579	0.03	OrthoFinder output from all 47 species
Cba_g04418	RHB1A	E3 ubiquitin ligase *(AIRP1) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g11755	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g00378	No alias	E3 ubiquitin ligase *(AIRP1) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g13040	No alias	E3 ubiquitin ligase *(AIRP1) & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01036545001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.04	OrthoFinder output from all 47 species
Mp6g04810.1	No alias	E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Msp_g00461	No alias	E3 ubiquitin ligase *(AIRP1) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g03361	No alias	E3 ubiquitin ligase *(AIRP1) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g36378	No alias	E3 ubiquitin ligase *(AIRP1) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g53893	No alias	E3 ubiquitin ligase *(AIRP1) & original description: none	0.01	OrthoFinder output from all 47 species
Spa_g50088	No alias	E3 ubiquitin ligase *(AIRP1) & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g00301	No alias	E3 ubiquiTin ligase *(AIRP1) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e012916_P001	RHB1A, Zm00001e012916	Probable E3 ubiquitin-protein ligase RHB1A...	0.03	OrthoFinder output from all 47 species
Zm00001e016257_P003	Zm00001e016257	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IDA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
BP	GO:0006914	autophagy	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009408	response to heat	None	Extended
BP	GO:0009414	response to water deprivation	IMP	Interproscan
BP	GO:0009415	response to water	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IMP	Interproscan
BP	GO:0009787	regulation of abscisic acid-activated signaling pathway	None	Extended
BP	GO:0009789	positive regulation of abscisic acid-activated signaling pathway	IMP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009967	positive regulation of signal transduction	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010286	heat acclimation	RCA	Interproscan
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010647	positive regulation of cell communication	None	Extended
BP	GO:0010726	positive regulation of hydrogen peroxide metabolic process	None	Extended
BP	GO:0010728	regulation of hydrogen peroxide biosynthetic process	None	Extended
BP	GO:0010729	positive regulation of hydrogen peroxide biosynthetic process	IMP	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0023056	positive regulation of signaling	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0061919	process utilizing autophagic mechanism	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901419	regulation of response to alcohol	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1903426	regulation of reactive oxygen species biosynthetic process	None	Extended
BP	GO:1903428	positive regulation of reactive oxygen species biosynthetic process	None	Extended
BP	GO:1905957	regulation of cellular response to alcohol	None	Extended
BP	GO:2000377	regulation of reactive oxygen species metabolic process	None	Extended
BP	GO:2000379	positive regulation of reactive oxygen species metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004124	cysteine synthase activity	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0009608	response to symbiont	IEP	HCCA
BP	GO:0009610	response to symbiotic fungus	IEP	HCCA
BP	GO:0009734	auxin-activated signaling pathway	IEP	HCCA
BP	GO:0010043	response to zinc ion	IEP	HCCA
BP	GO:0010072	primary shoot apical meristem specification	IEP	HCCA
BP	GO:0048527	lateral root development	IEP	HCCA
BP	GO:0048528	post-embryonic root development	IEP	HCCA
BP	GO:0090421	embryonic meristem initiation	IEP	HCCA
BP	GO:0090696	post-embryonic plant organ development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	102	144

External Links

No external refs found!

AT4G23450 (AtAIRP1, AIRP1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation