1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G23340

AT4G23340


Description : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein


Gene families : OG0002596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002596_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G23340

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00242710 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.03 OrthoFinder output from all 47 species
AMTR_s00052p00016200 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.04 OrthoFinder output from all 47 species
AMTR_s02838p00004170 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT4G03070 AOP1, AOP, AOP1.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.04 OrthoFinder output from all 47 species
GSVIVT01017181001 No alias Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.03 OrthoFinder output from all 47 species
GSVIVT01026928001 No alias Gibberellin 20-oxidase-like protein OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01035794001 No alias Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.03 OrthoFinder output from all 47 species
Gb_24086 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_26940 No alias Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.03 OrthoFinder output from all 47 species
Gb_26942 No alias Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.05 OrthoFinder output from all 47 species
Gb_26943 No alias Probable 2-oxoglutarate-dependent dioxygenase AOP1... 0.03 OrthoFinder output from all 47 species
Gb_27753 No alias Probable 2-oxoglutarate-dependent dioxygenase JRG21... 0.03 OrthoFinder output from all 47 species
Gb_30272 TDS4, TT18, LDOX, ANS Probable 2-oxoglutarate-dependent dioxygenase AOP1... 0.03 OrthoFinder output from all 47 species
Gb_30506 No alias Probable 2-oxoglutarate-dependent dioxygenase At5g05600... 0.03 OrthoFinder output from all 47 species
Gb_39251 No alias Probable 2-oxoglutarate-dependent dioxygenase At5g05600... 0.04 OrthoFinder output from all 47 species
Gb_41080 No alias Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.03 OrthoFinder output from all 47 species
Gb_41081 No alias Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.03 OrthoFinder output from all 47 species
MA_593542g0010 No alias 2-oxoglutarate-dependent dioxygenase DAO OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
MA_626930g0010 No alias Flavanone 3-dioxygenase 2 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Solyc01g006580.4.1 Solyc01g006580 Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.03 OrthoFinder output from all 47 species
Solyc01g006585.1.1 Solyc01g006585 Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.04 OrthoFinder output from all 47 species
Solyc01g006610.2.1 Solyc01g006610 Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.04 OrthoFinder output from all 47 species
Solyc02g062460.4.1 Solyc02g062460 Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.04 OrthoFinder output from all 47 species
Solyc03g025490.3.1 Solyc03g025490 Gibberellin 20-oxidase-like protein OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc04g053050.4.1 Solyc04g053050 Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.04 OrthoFinder output from all 47 species
Solyc06g066830.4.1 Solyc06g066830 Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.04 OrthoFinder output from all 47 species
Solyc06g067860.3.1 Solyc06g067860 Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.03 OrthoFinder output from all 47 species
Solyc06g067870.3.1 Solyc06g067870 Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.04 OrthoFinder output from all 47 species
Solyc12g042980.2.1 Solyc12g042980 Probable 2-oxoglutarate-dependent dioxygenase AOP1... 0.07 OrthoFinder output from all 47 species
Zm00001e036345_P001 Zm00001e036345 Probable 2-oxoglutarate-dependent dioxygenase AOP1... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008152 metabolic process ISS Interproscan
MF GO:0016491 oxidoreductase activity ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004871 obsolete signal transducer activity IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005834 heterotrimeric G-protein complex IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010065 primary meristem tissue development IEP HCCA
BP GO:0010067 procambium histogenesis IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
BP GO:0010089 xylem development IEP HCCA
BP GO:0016049 cell growth IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0033612 receptor serine/threonine kinase binding IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0048507 meristem development IEP HCCA
BP GO:0048508 embryonic meristem development IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
BP GO:0090506 axillary shoot meristem initiation IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA
CC GO:1905360 GTPase complex IEP HCCA
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 163 260
IPR026992 DIOX_N 10 75
No external refs found!