AT4G22290

Description : Ubiquitin-specific protease family C19-related protein

Gene families : OG0000929 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000929_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G22290

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00249170	evm_27.TU.AmTr_v1...	Uncharacterized membrane protein At1g16860...	0.04	OrthoFinder output from all 47 species
AMTR_s00074p00143470	evm_27.TU.AmTr_v1...	Uncharacterized membrane protein At1g16860...	0.04	OrthoFinder output from all 47 species
Adi_g085237	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g109835	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g11688	No alias	regulatory protein *(SHOU4) involved in cellulose...	0.02	OrthoFinder output from all 47 species
Ala_g02232	No alias	regulatory protein *(SHOU4) involved in cellulose...	0.02	OrthoFinder output from all 47 species
Als_g01771	No alias	regulatory protein *(SHOU4) involved in cellulose...	0.02	OrthoFinder output from all 47 species
Als_g49969	No alias	regulatory protein *(SHOU4) involved in cellulose...	0.02	OrthoFinder output from all 47 species
Aspi01Gene64060.t1	Aspi01Gene64060	regulatory protein *(SHOU4) involved in cellulose...	0.02	OrthoFinder output from all 47 species
Ceric.12G073600.1	Ceric.12G073600	regulatory protein *(SHOU4) involved in cellulose...	0.02	OrthoFinder output from all 47 species
Dac_g22034	No alias	regulatory protein *(SHOU4) involved in cellulose...	0.05	OrthoFinder output from all 47 species
Dcu_g14768	No alias	regulatory protein *(SHOU4) involved in cellulose...	0.02	OrthoFinder output from all 47 species
Dde_g02263	No alias	regulatory protein *(SHOU4) involved in cellulose...	0.03	OrthoFinder output from all 47 species
Gb_33458	No alias	SHOU4-type cellulose synthase CSC-interactive protein	0.03	OrthoFinder output from all 47 species
Pir_g11301	No alias	regulatory protein *(SHOU4) involved in cellulose...	0.03	OrthoFinder output from all 47 species
Sam_g16842	No alias	regulatory protein *(SHOU4) involved in cellulose...	0.04	OrthoFinder output from all 47 species
Sam_g26311	No alias	regulatory protein *(SHOU4) involved in cellulose...	0.02	OrthoFinder output from all 47 species
Spa_g18005	No alias	regulatory protein *(SHOU4) involved in cellulose...	0.03	OrthoFinder output from all 47 species
Spa_g18006	No alias	regulatory protein *(SHOU4) involved in cellulose...	0.02	OrthoFinder output from all 47 species
Zm00001e007013_P001	Zm00001e007013	SHOU4-type cellulose synthase CSC-interactive protein	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	ISS	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0009314	response to radiation	IEP	HCCA
BP	GO:0009416	response to light stimulus	IEP	HCCA
BP	GO:0009639	response to red or far red light	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT4G22290

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation