1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G20820

AT4G20820


Description : FAD-binding Berberine family protein


Gene families : OG0000307 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000307_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G20820
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00124850 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00227420 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
AMTR_s00038p00162870 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
AMTR_s00038p00163940 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 OrthoFinder output from all 47 species
AT1G26390 No alias FAD-binding Berberine family protein 0.04 OrthoFinder output from all 47 species
AT1G26400 No alias FAD-binding Berberine family protein 0.06 OrthoFinder output from all 47 species
AT1G30700 No alias FAD-binding Berberine family protein 0.04 OrthoFinder output from all 47 species
AT2G34810 No alias FAD-binding Berberine family protein 0.05 OrthoFinder output from all 47 species
AT5G44410 No alias FAD-binding Berberine family protein 0.05 OrthoFinder output from all 47 species
AT5G44440 No alias FAD-binding Berberine family protein 0.04 OrthoFinder output from all 47 species
Ala_g04429 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.05 OrthoFinder output from all 47 species
Aob_g32306 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Aob_g33483 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Aob_g33484 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene68383.t1 Aspi01Gene68383 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.08 OrthoFinder output from all 47 species
Aspi01Gene70323.t1 Aspi01Gene70323 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Dac_g03939 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.06 OrthoFinder output from all 47 species
Dac_g35172 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Dde_g30309 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.05 OrthoFinder output from all 47 species
GSVIVT01015790001 No alias Berberine bridge enzyme-like 21 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01020744001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
GSVIVT01020745001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
Gb_03609 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
Gb_21186 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 OrthoFinder output from all 47 species
Gb_24404 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
Gb_24415 MEE23, EDA28 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 OrthoFinder output from all 47 species
LOC_Os06g35560.1 LOC_Os06g35560 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 OrthoFinder output from all 47 species
LOC_Os06g35700.1 LOC_Os06g35700 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
LOC_Os08g06170.1 LOC_Os08g06170 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
LOC_Os08g06190.1 LOC_Os08g06190 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
Len_g07379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428737g0020 No alias Berberine bridge enzyme-like 24 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_8516716g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
Mp7g02610.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 OrthoFinder output from all 47 species
Nbi_g30829 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Ore_g18955 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Ore_g38675 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Pnu_g21779 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Solyc02g070070.1.1 Solyc02g070070 Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc02g070110.1.1 Solyc02g070110 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 OrthoFinder output from all 47 species
Solyc02g070120.1.1 Solyc02g070120 Cannabidiolic acid synthase OS=Cannabis sativa... 0.04 OrthoFinder output from all 47 species
Solyc02g070130.1.1 Solyc02g070130 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
Solyc02g070160.1.1 Solyc02g070160 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
Solyc02g079480.1.1 Solyc02g079480 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
Solyc10g054540.1.1 Solyc10g054540 Berberine bridge enzyme-like 26 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Tin_g25064 No alias EC_1.1 oxidoreductase acTing on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Zm00001e021719_P001 Zm00001e021719 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity ISS Interproscan
CC GO:0009507 chloroplast ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 86 221
IPR012951 BBE 466 524
No external refs found!