AT4G20260 (PCAP1, ATPCAP1)

Aliases : PCAP1, ATPCAP1

Description : plasma-membrane associated cation-binding protein 1

Gene families : OG0002064 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002064_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G20260

Target	Alias	Description	ECC score	Gene Family Method
Adi_g010345	No alias	phosphoinositide signalling effector *(PCaP) & original...	0.04	OrthoFinder output from all 47 species
Adi_g078581	No alias	phosphoinositide signalling effector *(PCaP) & original...	0.03	OrthoFinder output from all 47 species
Aev_g02134	PCAP1, ATPCAP1	phosphoinositide signalling effector *(PCaP) & original...	0.02	OrthoFinder output from all 47 species
Aev_g36750	PCAP1, ATPCAP1	phosphoinositide signalling effector *(PCaP) & original...	0.03	OrthoFinder output from all 47 species
Als_g03561	PCAP1, ATPCAP1	phosphoinositide signalling effector *(PCaP) & original...	0.02	OrthoFinder output from all 47 species
Als_g38442	PCAP1, ATPCAP1	phosphoinositide signalling effector *(PCaP) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene54498.t1	PCAP1, ATPCAP1,...	phosphoinositide signalling effector *(PCaP) & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0007.g010779	PCAP1, ATPCAP1	phosphoinositide signalling effector *(PCaP) & original...	0.04	OrthoFinder output from all 47 species
Azfi_s0661.g081441	No alias	phosphoinositide signalling effector *(PCaP) & original...	0.03	OrthoFinder output from all 47 species
Dac_g37225	PCAP1, ATPCAP1	phosphoinositide signalling effector *(PCaP) & original...	0.02	OrthoFinder output from all 47 species
Dcu_g02451	PCAP1, ATPCAP1	phosphoinositide signalling effector *(PCaP) & original...	0.03	OrthoFinder output from all 47 species
Gb_32620	PCAP1, ATPCAP1	Plasma membrane-associated cation-binding protein 1...	0.03	OrthoFinder output from all 47 species
LOC_Os02g18410.1	PCAP1, ATPCAP1,...	Plasma membrane-associated cation-binding protein 1...	0.05	OrthoFinder output from all 47 species
Lfl_g21282	PCAP1, ATPCAP1	phosphoinositide signalling effector *(PCaP) & original...	0.02	OrthoFinder output from all 47 species
MA_15276g0010	PCAP1, ATPCAP1	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_205874g0010	PCAP1, ATPCAP1	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_209808g0010	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
MA_30683g0010	PCAP1, ATPCAP1	Plasma membrane-associated cation-binding protein 1...	0.03	OrthoFinder output from all 47 species
Mp4g05850.1	No alias	Plasma membrane-associated cation-binding protein 1...	0.04	OrthoFinder output from all 47 species
Msp_g09848	PCAP1, ATPCAP1	phosphoinositide signalling effector *(PCaP) & original...	0.03	OrthoFinder output from all 47 species
Nbi_g39657	PCAP1, ATPCAP1	phosphoinositide signalling effector *(PCaP) & original...	0.03	OrthoFinder output from all 47 species
Pnu_g18219	PCAP1, ATPCAP1	phosphoinositide signalling effector *(PCaP) & original...	0.02	OrthoFinder output from all 47 species
Spa_g28981	PCAP1, ATPCAP1	phosphoinositide signalling effector *(PCaP) & original...	0.03	OrthoFinder output from all 47 species
Zm00001e014131_P002	PCAP1, ATPCAP1,...	Plasma membrane-associated cation-binding protein 1...	0.03	OrthoFinder output from all 47 species
Zm00001e016382_P004	PCAP1, ATPCAP1,...	Salt stress root protein RS1 OS=Oryza sativa subsp....	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	None	Extended
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0001558	regulation of cell growth	None	Extended
BP	GO:0002237	response to molecule of bacterial origin	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005507	copper ion binding	IDA	Interproscan
MF	GO:0005509	calcium ion binding	IDA	Interproscan
MF	GO:0005515	protein binding	IPI	Interproscan
MF	GO:0005516	calmodulin binding	IDA	Interproscan
MF	GO:0005543	phospholipid binding	None	Extended
MF	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	IDA	Interproscan
MF	GO:0005547	phosphatidylinositol-3,4,5-trisphosphate binding	IDA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005773	vacuole	IDA	Interproscan
CC	GO:0005874	microtubule	None	Extended
CC	GO:0005881	cytoplasmic microtubule	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISS	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006497	protein lipidation	None	Extended
BP	GO:0006498	N-terminal protein lipidation	None	Extended
BP	GO:0006499	N-terminal protein myristoylation	IMP	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0006816	calcium ion transport	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006970	response to osmotic stress	RCA	Interproscan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007030	Golgi organization	RCA	Interproscan
BP	GO:0007154	cell communication	None	Extended
MF	GO:0008017	microtubule binding	IDA	Interproscan
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008289	lipid binding	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009267	cellular response to starvation	None	Extended
BP	GO:0009409	response to cold	IEP	Interproscan
BP	GO:0009414	response to water deprivation	IEP	Interproscan
BP	GO:0009415	response to water	None	Extended
CC	GO:0009506	plasmodesma	IDA	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	RCA	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009735	response to cytokinin	IDA	Interproscan
BP	GO:0009743	response to carbohydrate	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010039	response to iron ion	None	Extended
BP	GO:0010350	cellular response to magnesium starvation	IEP	Interproscan
BP	GO:0010555	response to mannitol	None	Extended
BP	GO:0010638	positive regulation of organelle organization	None	Extended
BP	GO:0010639	negative regulation of organelle organization	None	Extended
MF	GO:0015631	tubulin binding	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016032	viral process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0018008	N-terminal peptidyl-glycine N-myristoylation	IDA	Interproscan
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018201	peptidyl-glycine modification	None	Extended
BP	GO:0018377	protein myristoylation	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0022604	regulation of cell morphogenesis	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0030308	negative regulation of cell growth	None	Extended
BP	GO:0030865	cortical cytoskeleton organization	None	Extended
BP	GO:0031110	regulation of microtubule polymerization or depolymerization	None	Extended
BP	GO:0031111	negative regulation of microtubule polymerization or depolymerization	None	Extended
BP	GO:0031112	positive regulation of microtubule polymerization or depolymerization	None	Extended
BP	GO:0031113	regulation of microtubule polymerization	None	Extended
BP	GO:0031114	regulation of microtubule depolymerization	None	Extended
BP	GO:0031115	negative regulation of microtubule polymerization	IDA	Interproscan
BP	GO:0031117	positive regulation of microtubule depolymerization	IDA	Interproscan
BP	GO:0031122	cytoplasmic microtubule organization	None	Extended
BP	GO:0031333	negative regulation of protein-containing complex assembly	None	Extended
BP	GO:0031365	N-terminal protein amino acid modification	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0032026	response to magnesium ion	None	Extended
BP	GO:0032271	regulation of protein polymerization	None	Extended
BP	GO:0032272	negative regulation of protein polymerization	None	Extended
BP	GO:0032886	regulation of microtubule-based process	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
MF	GO:0035091	phosphatidylinositol binding	None	Extended
BP	GO:0035864	response to potassium ion	None	Extended
BP	GO:0035865	cellular response to potassium ion	IEP	Interproscan
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042594	response to starvation	None	Extended
BP	GO:0042742	defense response to bacterium	IEP	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043243	positive regulation of protein-containing complex disassembly	None	Extended
BP	GO:0043244	regulation of protein-containing complex disassembly	None	Extended
BP	GO:0043254	regulation of protein-containing complex assembly	None	Extended
MF	GO:0043325	phosphatidylinositol-3,4-bisphosphate binding	IDA	Interproscan
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043543	protein acylation	None	Extended
BP	GO:0043622	cortical microtubule organization	IDA	Interproscan
BP	GO:0043622	cortical microtubule organization	IMP	Interproscan
BP	GO:0044087	regulation of cellular component biogenesis	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045926	negative regulation of growth	None	Extended
CC	GO:0046658	obsolete anchored component of plasma membrane	IDA	Interproscan
BP	GO:0046686	response to cadmium ion	RCA	Interproscan
BP	GO:0046688	response to copper ion	None	Extended
BP	GO:0046794	transport of virus	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048640	negative regulation of developmental growth	None	Extended
BP	GO:0048767	root hair elongation	RCA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051093	negative regulation of developmental process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051129	negative regulation of cellular component organization	None	Extended
BP	GO:0051130	positive regulation of cellular component organization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051493	regulation of cytoskeleton organization	None	Extended
BP	GO:0051494	negative regulation of cytoskeleton organization	None	Extended
BP	GO:0051495	positive regulation of cytoskeleton organization	None	Extended
BP	GO:0051510	regulation of unidimensional cell growth	None	Extended
BP	GO:0051511	negative regulation of unidimensional cell growth	IMP	Interproscan
BP	GO:0051592	response to calcium ion	IDA	Interproscan
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0062197	cellular response to chemical stress	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0070507	regulation of microtubule cytoskeleton organization	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071216	cellular response to biotic stimulus	None	Extended
BP	GO:0071219	cellular response to molecule of bacterial origin	IEP	Interproscan
BP	GO:0071241	cellular response to inorganic substance	None	Extended
BP	GO:0071248	cellular response to metal ion	None	Extended
BP	GO:0071280	cellular response to copper ion	IEP	Interproscan
BP	GO:0071281	cellular response to iron ion	IEP	Interproscan
BP	GO:0071286	cellular response to magnesium ion	IEP	Interproscan
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071322	cellular response to carbohydrate stimulus	None	Extended
BP	GO:0071325	cellular response to mannitol stimulus	IEP	Interproscan
BP	GO:0071470	cellular response to osmotic stress	None	Extended
BP	GO:0071472	cellular response to salt stress	IEP	Interproscan
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072708	response to sorbitol	None	Extended
BP	GO:0072709	cellular response to sorbitol	IEP	Interproscan
BP	GO:0075733	intracellular transport of virus	IMP	Interproscan
MF	GO:0080025	phosphatidylinositol-3,5-bisphosphate binding	IDA	Interproscan
BP	GO:0097435	supramolecular fiber organization	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0099080	supramolecular complex	None	Extended
CC	GO:0099081	supramolecular polymer	None	Extended
CC	GO:0099512	supramolecular fiber	None	Extended
CC	GO:0099513	polymeric cytoskeletal fiber	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	None	Extended
BP	GO:1901879	regulation of protein depolymerization	None	Extended
BP	GO:1901881	positive regulation of protein depolymerization	None	Extended
MF	GO:1901981	phosphatidylinositol phosphate binding	None	Extended
BP	GO:1902903	regulation of supramolecular fiber organization	None	Extended
BP	GO:1902904	negative regulation of supramolecular fiber organization	None	Extended
BP	GO:1902905	positive regulation of supramolecular fiber organization	None	Extended
MF	GO:1902936	phosphatidylinositol bisphosphate binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0002020	protease binding	IEP	HCCA
CC	GO:0005774	vacuolar membrane	IEP	HCCA
CC	GO:0005776	autophagosome	IEP	HCCA
BP	GO:0006787	porphyrin-containing compound catabolic process	IEP	HCCA
BP	GO:0006914	autophagy	IEP	HCCA
BP	GO:0009734	auxin-activated signaling pathway	IEP	HCCA
BP	GO:0009787	regulation of abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009789	positive regulation of abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009891	positive regulation of biosynthetic process	IEP	HCCA
BP	GO:0009967	positive regulation of signal transduction	IEP	HCCA
BP	GO:0010029	regulation of seed germination	IEP	HCCA
BP	GO:0010072	primary shoot apical meristem specification	IEP	HCCA
BP	GO:0010150	leaf senescence	IEP	HCCA
BP	GO:0010167	response to nitrate	IEP	HCCA
BP	GO:0010260	obsolete animal organ senescence	IEP	HCCA
BP	GO:0010647	positive regulation of cell communication	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
BP	GO:0015706	nitrate transmembrane transport	IEP	HCCA
BP	GO:0015996	chlorophyll catabolic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
BP	GO:0023056	positive regulation of signaling	IEP	HCCA
BP	GO:0031347	regulation of defense response	IEP	HCCA
BP	GO:0033015	tetrapyrrole catabolic process	IEP	HCCA
BP	GO:0046149	pigment catabolic process	IEP	HCCA
BP	GO:0048527	lateral root development	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0048584	positive regulation of response to stimulus	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0061919	process utilizing autophagic mechanism	IEP	HCCA
BP	GO:0080134	regulation of response to stress	IEP	HCCA
BP	GO:0090421	embryonic meristem initiation	IEP	HCCA
BP	GO:0090693	plant organ senescence	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098661	inorganic anion transmembrane transport	IEP	HCCA
BP	GO:1900140	regulation of seedling development	IEP	HCCA
BP	GO:1901419	regulation of response to alcohol	IEP	HCCA
BP	GO:1902025	nitrate import	IEP	HCCA
BP	GO:1905957	regulation of cellular response to alcohol	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008469	DREPP	1	225

External Links

No external refs found!

AT4G20260 (PCAP1, ATPCAP1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation