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AT4G19003 (VPS25)


Aliases : VPS25

Description : E2F/DP family winged-helix DNA-binding domain


Gene families : OG0005916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005916_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G19003

Target Alias Description ECC score Gene Family Method Actions
Cre02.g076400 VPS25 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder output from all 47 species
GSVIVT01013027001 VPS25 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.04 OrthoFinder output from all 47 species
LOC_Os01g46932.1 VPS25, LOC_Os01g46932 component VPS25 of ESCRT-II complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000814 ESCRT II complex ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0016192 vesicle-mediated transport ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
BP GO:0006301 postreplication repair IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010039 response to iron ion IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0018738 S-formylglutathione hydrolase activity IEP HCCA
CC GO:0031371 ubiquitin conjugating enzyme complex IEP HCCA
CC GO:0031372 UBC13-MMS2 complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
BP GO:0042631 cellular response to water deprivation IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046686 response to cadmium ion IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071229 cellular response to acid chemical IEP HCCA
BP GO:0071462 cellular response to water stimulus IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
BP GO:1901701 cellular response to oxygen-containing compound IEP HCCA
InterPro domains Description Start Stop
IPR008570 ESCRT-II_cplx_Vps25-sub 13 145
No external refs found!