LOC_Os01g09100 (Os01g0186000)

Aliases : Os01g0186000

Description : 27.3.32 RNA.regulation of transcription.WRKY domain transcription factor family member of WRKY Transcription Factor Group II-c WRKY DNA-binding protein 50 (WRKY50)

Gene families : OG_01_0000005 (Gene family) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): LOC_Os01g09100
Cluster	HCCA cluster: Cluster_192

Target	Alias	Description	ECC score	Gene Family Method
AT1G66560	ATWRKY64, WRKY64	WRKY DNA-binding protein 64	0.05	Gene family
AT2G47260	WRKY23, ATWRKY23	WRKY DNA-binding protein 23	0.01	Gene family
AT3G01970	ATWRKY45, WRKY45	WRKY DNA-binding protein 45	0.02	Gene family
AT5G49520	WRKY48, ATWRKY48	WRKY DNA-binding protein 48	0.01	Gene family
GSVIVT01012196001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
GSVIVT01021397001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
GSVIVT01022067001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
GSVIVT01025562001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
GSVIVT01028129001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
GSVIVT01028244001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
GSVIVT01029265001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
GSVIVT01033188001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.01	Gene family
LOC_Os01g46800	Os01g0656400	27.3.32 RNA.regulation of transcription.WRKY domain...	0.01	Gene family
LOC_Os01g47560	Os01g0665500,...	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
LOC_Os01g51690	Os01g0714800	27.3.32 RNA.regulation of transcription.WRKY domain...	0.01	Gene family
LOC_Os01g60520	Os01g0820700	27.3.32 RNA.regulation of transcription.WRKY domain...	0.01	Gene family
LOC_Os04g21950	Os04g0287400	27.3.32 RNA.regulation of transcription.WRKY domain...	0.01	Gene family
LOC_Os04g50920	Os04g0597300	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
LOC_Os09g25070	Os09g0417800	27.3.32 RNA.regulation of transcription.WRKY domain...	0.01	Gene family
LOC_Os10g18099	No alias	No description available	0.07	Gene family
LOC_Os11g02540	Os11g0117550,...	No description available	0.03	Gene family
LOC_Os11g29870	Os11g0490900	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
LOC_Os12g02470	Os12g0116750,...	No description available	0.03	Gene family
MA_10434976g0010	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.14	Gene family
MA_136551g0010	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.01	Gene family
Smo77979	PACid_15422458	27.3.32 RNA.regulation of transcription.WRKY domain...	0.01	Gene family
Smo92733	PACid_15420668	27.3.32 RNA.regulation of transcription.WRKY domain...	0.01	Gene family
Solyc02g071130.3.1	Solyc02g071130.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.01	Gene family
Solyc04g051690.3.1	Solyc04g051690.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Solyc05g015850.3.1	Solyc05g015850.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Solyc05g055750.3.1	Solyc05g055750.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.01	Gene family
Solyc07g056280.3.1	Solyc07g056280.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Solyc08g067360.3.1	Solyc08g067360.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Zm00001d002405	GRMZM2G071907	27.3.32 RNA.regulation of transcription.WRKY domain...	0.06	Gene family
Zm00001d004086	GRMZM2G102583	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Zm00001d008793	GRMZM2G516301	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
Zm00001d009939	GRMZM2G057116	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Zm00001d026218	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Zm00001d041129	No alias	No description available	0.05	Gene family
Zm00001d053369	GRMZM2G038158	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	107	163

External Links

No external refs found!

LOC_Os01g09100 (Os01g0186000)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation