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AT4G18650


Description : transcription factor-related


Gene families : OG0001119 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001119_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G18650
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AT4G18660 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.06 OrthoFinder output from all 47 species
AT4G18680 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.06 OrthoFinder output from all 47 species
Adi_g068899 No alias DOG-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65334.t1 Aspi01Gene65334 DOG-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021229001 No alias Protein DOG1-like 4 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os05g48650.1 LOC_Os05g48650 transcription factor (DOG) 0.04 OrthoFinder output from all 47 species
Lfl_g00482 No alias DOG-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22337 GSQ5, DOG1, ATDOG1 DOG-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27300 No alias DOG-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g28827 No alias DOG-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g072570.2.1 GSQ5, DOG1,... transcription factor (DOG) 0.04 OrthoFinder output from all 47 species
Solyc02g073580.1.1 Solyc02g073580 transcription factor (DOG) 0.04 OrthoFinder output from all 47 species
Solyc03g006120.4.1 Solyc03g006120 transcription factor (DOG) 0.06 OrthoFinder output from all 47 species
Solyc05g056410.1.1 Solyc05g056410 transcription factor (DOG) 0.06 OrthoFinder output from all 47 species
Solyc07g062380.1.1 Solyc07g062380 transcription factor (DOG) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009735 response to cytokinin IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009756 carbohydrate mediated signaling IEP HCCA
BP GO:0009845 seed germination IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010182 sugar mediated signaling pathway IEP HCCA
BP GO:0010431 seed maturation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032870 cellular response to hormone stimulus IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
CC GO:0042735 protein body IEP HCCA
MF GO:0043424 protein histidine kinase binding IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0048366 leaf development IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0048825 cotyledon development IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0071215 cellular response to abscisic acid stimulus IEP HCCA
BP GO:0071310 cellular response to organic substance IEP HCCA
BP GO:0071396 cellular response to lipid IEP HCCA
BP GO:0071495 cellular response to endogenous stimulus IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
BP GO:0097306 cellular response to alcohol IEP HCCA
BP GO:1901701 cellular response to oxygen-containing compound IEP HCCA
InterPro domains Description Start Stop
IPR025422 TGA_domain 27 102
No external refs found!