AT4G18300

Description : Trimeric LpxA-like enzyme

Gene families : OG0003499 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003499_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G18300

Target	Alias	Description	ECC score	Gene Family Method
AT3G02270	No alias	Trimeric LpxA-like enzyme	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021122.14	No alias	Protein biosynthesis.translation...	0.02	OrthoFinder output from all 47 species
Cre12.g502200	No alias	Protein biosynthesis.translation...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003743	translation initiation factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006417	regulation of translation	None	Extended
BP	GO:0006446	regulation of translational initiation	ISS	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010608	post-transcriptional regulation of gene expression	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0034248	regulation of amide metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005835	NTP_transferase_dom	26	175
IPR003307	W2_domain	631	708
IPR001451	Hexapep	377	409

External Links

No external refs found!

AT4G18300

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation