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AT4G17940


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG0000659 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000659_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G17940

Target Alias Description ECC score Gene Family Method Actions
Adi_g106428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g56500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12177.t1 Aspi01Gene12177 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12764.t2 Aspi01Gene12764 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44596.t2 Aspi01Gene44596 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os10g42610.1 LOC_Os10g42610 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g05516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432283g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_763957g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g32843 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003146 No alias not classified & original description: CDS=1-1278 0.03 OrthoFinder output from all 47 species
Sam_g07886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g068130.3.1 Solyc06g068130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g008210.4.1 Solyc07g008210 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g50879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP HCCA
BP GO:0009742 brassinosteroid mediated signaling pathway IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0043401 steroid hormone mediated signaling pathway IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048316 seed development IEP HCCA
BP GO:0048481 plant ovule development IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA

No InterPro domains available for this sequence

No external refs found!