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  5. AT4G15980

AT4G15980


Description : Plant invertase/pectin methylesterase inhibitor superfamily


Gene families : OG0000147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G15980

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00238240 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00003p00239700 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
AMTR_s00033p00227850 evm_27.TU.AmTr_v1... Probable pectinesterase/pectinesterase inhibitor 21... 0.1 OrthoFinder output from all 47 species
AMTR_s00040p00188020 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.09 OrthoFinder output from all 47 species
AMTR_s00129p00028250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.11 OrthoFinder output from all 47 species
AT2G26450 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.07 OrthoFinder output from all 47 species
AT3G10710 RHS12 root hair specific 12 0.04 OrthoFinder output from all 47 species
AT5G04960 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 OrthoFinder output from all 47 species
Adi_g006880 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aev_g12056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38992 ATPME3, PME3 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ala_g32996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07772 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0113.g045942 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.19G055400.1 Ceric.19G055400 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.19G056000.1 ATPMEPCRF,... EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.30G016400.1 ATPMEPCRF,... EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Dac_g21852 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Dac_g22798 PME44, ATPME44 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Dac_g38611 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dcu_g01562 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dcu_g13634 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01017687001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 OrthoFinder output from all 47 species
GSVIVT01023135001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01026518001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01028041001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01028264001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.13 OrthoFinder output from all 47 species
GSVIVT01028265001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.13 OrthoFinder output from all 47 species
GSVIVT01031165001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.12 OrthoFinder output from all 47 species
GSVIVT01035108001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
LOC_Os03g18860.1 LOC_Os03g18860 pectin methylesterase 0.05 OrthoFinder output from all 47 species
LOC_Os04g38560.1 LOC_Os04g38560 pectin methylesterase 0.05 OrthoFinder output from all 47 species
LOC_Os07g49100.1 LOC_Os07g49100 pectin methylesterase 0.05 OrthoFinder output from all 47 species
LOC_Os08g34910.1 LOC_Os08g34910 pectin methylesterase 0.07 OrthoFinder output from all 47 species
LOC_Os09g26360.1 LOC_Os09g26360 pectin methylesterase 0.07 OrthoFinder output from all 47 species
Mp6g15150.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp8g09330.1 RHS12 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Msp_g10078 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Nbi_g12022 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Nbi_g13298 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ore_g20165 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010222 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021279 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Sam_g07927 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Solyc01g057220.3.1 Solyc01g057220 pectin methylesterase 0.06 OrthoFinder output from all 47 species
Solyc01g066360.3.1 Solyc01g066360 pectin methylesterase 0.11 OrthoFinder output from all 47 species
Solyc01g066390.4.1 Solyc01g066390 Probable pectinesterase/pectinesterase inhibitor 58... 0.11 OrthoFinder output from all 47 species
Solyc01g066420.3.1 Solyc01g066420 pectin methylesterase 0.1 OrthoFinder output from all 47 species
Solyc01g099940.3.1 Solyc01g099940 pectin methylesterase 0.07 OrthoFinder output from all 47 species
Solyc03g078090.4.1 Solyc03g078090 pectin methylesterase 0.1 OrthoFinder output from all 47 species
Solyc07g017560.4.1 Solyc07g017560 pectin methylesterase 0.09 OrthoFinder output from all 47 species
Solyc07g064170.3.1 ATPMEPCRA,... pectin methylesterase 0.04 OrthoFinder output from all 47 species
Solyc12g099410.2.1 Solyc12g099410 pectin methylesterase 0.09 OrthoFinder output from all 47 species
Tin_g13216 No alias EC_3.1 hydrolase acTing on ester bond & original... 0.02 OrthoFinder output from all 47 species
Zm00001e007917_P002 Zm00001e007917 pectin methylesterase 0.11 OrthoFinder output from all 47 species
Zm00001e009863_P001 Zm00001e009863 pectin methylesterase 0.08 OrthoFinder output from all 47 species
Zm00001e034231_P001 Zm00001e034231 pectin methylesterase 0.05 OrthoFinder output from all 47 species
Zm00001e035932_P003 Zm00001e035932 pectin methylesterase 0.07 OrthoFinder output from all 47 species
Zm00001e041006_P001 Zm00001e041006 pectin methylesterase 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009505 plant-type cell wall ISS Interproscan
BP GO:0030048 actin filament-based movement RCA Interproscan
MF GO:0030599 pectinesterase activity ISS Interproscan
CC GO:0048046 apoplast IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001558 regulation of cell growth IEP HCCA
MF GO:0004564 beta-fructofuranosidase activity IEP HCCA
MF GO:0005451 obsolete monoatomic cation:proton antiporter activity IEP HCCA
CC GO:0005834 heterotrimeric G-protein complex IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006814 sodium ion transport IEP HCCA
BP GO:0010351 lithium ion transport IEP HCCA
MF GO:0015081 sodium ion transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015385 sodium:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016175 superoxide-generating NAD(P)H oxidase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0022604 regulation of cell morphogenesis IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035725 sodium ion transmembrane transport IEP HCCA
BP GO:0048868 pollen tube development IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
MF GO:0051139 metal cation:proton antiporter activity IEP HCCA
BP GO:0051510 regulation of unidimensional cell growth IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140828 metal cation:monoatomic cation antiporter activity IEP HCCA
CC GO:1905360 GTPase complex IEP HCCA
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 48 195
IPR000070 Pectinesterase_cat 391 688
No external refs found!