AT4G15610

Description : Uncharacterised protein family (UPF0497)

Gene families : OG0001933 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001933_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G15610

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00265970	evm_27.TU.AmTr_v1...	Casparian strip membrane protein 3 OS=Sorghum bicolor	0.03	OrthoFinder output from all 47 species
AMTR_s00016p00176090	evm_27.TU.AmTr_v1...	CASP-like protein 1F1 OS=Ricinus communis	0.03	OrthoFinder output from all 47 species
AMTR_s00016p00177940	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
AMTR_s00016p00178190	evm_27.TU.AmTr_v1...	CASP-like protein 1F1 OS=Vitis vinifera	0.03	OrthoFinder output from all 47 species
AMTR_s00040p00135930	evm_27.TU.AmTr_v1...	Casparian strip membrane protein 2 OS=Vitis vinifera	0.04	OrthoFinder output from all 47 species
AT1G14160	No alias	Uncharacterised protein family (UPF0497)	0.07	OrthoFinder output from all 47 species
AT3G06390	No alias	Uncharacterised protein family (UPF0497)	0.06	OrthoFinder output from all 47 species
AT4G03540	No alias	Uncharacterised protein family (UPF0497)	0.03	OrthoFinder output from all 47 species
AT4G15620	No alias	Uncharacterised protein family (UPF0497)	0.06	OrthoFinder output from all 47 species
AT4G20390	No alias	Uncharacterised protein family (UPF0497)	0.06	OrthoFinder output from all 47 species
AT5G44550	No alias	Uncharacterised protein family (UPF0497)	0.07	OrthoFinder output from all 47 species
GSVIVT01033894001	No alias	Casparian strip membrane protein 1 OS=Vitis vinifera	0.03	OrthoFinder output from all 47 species
Gb_11696	No alias	CASP-like protein 1U1 OS=Picea sitchensis...	0.04	OrthoFinder output from all 47 species
Gb_12159	No alias	CASP-like protein 1U1 OS=Picea sitchensis...	0.05	OrthoFinder output from all 47 species
Gb_26811	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Gb_26813	No alias	CASP-like protein 1U1 OS=Picea sitchensis...	0.02	OrthoFinder output from all 47 species
Gb_26814	No alias	CASP-like protein 1U1 OS=Picea sitchensis...	0.03	OrthoFinder output from all 47 species
Gb_40899	No alias	CASP-like protein 1U1 OS=Picea sitchensis...	0.03	OrthoFinder output from all 47 species
LOC_Os01g13560.1	LOC_Os01g13560	CASP-like protein 1C1 OS=Oryza sativa subsp. japonica...	0.06	OrthoFinder output from all 47 species
LOC_Os01g26120.1	LOC_Os01g26120	CASP-like protein 1E1 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
LOC_Os02g36845.1	LOC_Os02g36845	Casparian strip membrane protein 7 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
LOC_Os04g58760.1	LOC_Os04g58760	Casparian strip membrane protein 1 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
MA_5618864g0010	No alias	CASP-like protein 1U1 OS=Picea sitchensis...	0.04	OrthoFinder output from all 47 species
MA_67384g0020	No alias	CASP-like protein 1U1 OS=Picea sitchensis...	0.04	OrthoFinder output from all 47 species
MA_90653g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_93690g0010	No alias	Casparian strip membrane protein 1 OS=Pinus taeda...	0.04	OrthoFinder output from all 47 species
Mp3g16500.1	No alias	CASP-like protein 1U1 OS=Marchantia polymorpha...	0.03	OrthoFinder output from all 47 species
Solyc01g067330.3.1	Solyc01g067330	CASP-like protein 1E1 OS=Glycine max...	0.07	OrthoFinder output from all 47 species
Solyc03g097720.4.1	Solyc03g097720	CASP-like protein 1F1 OS=Vitis vinifera...	0.03	OrthoFinder output from all 47 species
Solyc04g005620.3.1	Solyc04g005620	Casparian strip membrane protein 2 OS=Solanum demissum...	0.03	OrthoFinder output from all 47 species
Solyc06g072550.3.1	Solyc06g072550	CASP-like protein 1F1 OS=Vitis vinifera...	0.02	OrthoFinder output from all 47 species
Solyc06g074230.3.1	Solyc06g074230	Casparian strip membrane protein 2 OS=Triphysaria...	0.03	OrthoFinder output from all 47 species
Solyc09g010200.4.1	Solyc09g010200	Casparian strip membrane protein 1 OS=Nicotiana tabacum...	0.03	OrthoFinder output from all 47 species
Solyc10g083250.2.1	Solyc10g083250	Casparian strip membrane protein 1 OS=Nicotiana tabacum...	0.03	OrthoFinder output from all 47 species
Zm00001e006491_P001	Zm00001e006491	Casparian strip membrane protein 2 OS=Zea mays...	0.04	OrthoFinder output from all 47 species
Zm00001e021080_P001	Zm00001e021080	CASP-like protein 1U4 OS=Sorghum bicolor...	0.05	OrthoFinder output from all 47 species
Zm00001e024279_P001	Zm00001e024279	Casparian strip membrane protein 2 OS=Sorghum bicolor...	0.03	OrthoFinder output from all 47 species
Zm00001e026902_P001	Zm00001e026902	CASP-like protein 1C2 OS=Zea mays (sp\|b6szu6\|cspl5_maize : 227.0)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005768	endosome	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005802	trans-Golgi network	IDA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006865	amino acid transport	RCA	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009404	toxin metabolic process	None	Extended
BP	GO:0009407	toxin catabolic process	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010167	response to nitrate	RCA	Interproscan
BP	GO:0010583	response to cyclopentenone	RCA	Interproscan
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
BP	GO:0015706	nitrate transmembrane transport	RCA	Interproscan
BP	GO:0015849	organic acid transport	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098661	inorganic anion transmembrane transport	None	Extended
BP	GO:0098754	detoxification	None	Extended
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902025	nitrate import	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000249	C-22 sterol desaturase activity	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004557	alpha-galactosidase activity	IEP	HCCA
MF	GO:0004564	beta-fructofuranosidase activity	IEP	HCCA
MF	GO:0004575	sucrose alpha-glucosidase activity	IEP	HCCA
BP	GO:0005985	sucrose metabolic process	IEP	HCCA
BP	GO:0005987	sucrose catabolic process	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006625	protein targeting to peroxisome	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
BP	GO:0006635	fatty acid beta-oxidation	IEP	HCCA
BP	GO:0006643	membrane lipid metabolic process	IEP	HCCA
BP	GO:0006664	glycolipid metabolic process	IEP	HCCA
BP	GO:0006665	sphingolipid metabolic process	IEP	HCCA
BP	GO:0006672	ceramide metabolic process	IEP	HCCA
BP	GO:0006677	glycosylceramide metabolic process	IEP	HCCA
BP	GO:0006687	glycosphingolipid metabolic process	IEP	HCCA
BP	GO:0006722	triterpenoid metabolic process	IEP	HCCA
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
BP	GO:0007568	aging	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0009062	fatty acid catabolic process	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009313	oligosaccharide catabolic process	IEP	HCCA
BP	GO:0009734	auxin-activated signaling pathway	IEP	HCCA
BP	GO:0009755	hormone-mediated signaling pathway	IEP	HCCA
BP	GO:0009804	coumarin metabolic process	IEP	HCCA
BP	GO:0009805	coumarin biosynthetic process	IEP	HCCA
BP	GO:0009830	cell wall modification involved in abscission	IEP	HCCA
BP	GO:0010072	primary shoot apical meristem specification	IEP	HCCA
BP	GO:0010150	leaf senescence	IEP	HCCA
BP	GO:0010351	lithium ion transport	IEP	HCCA
BP	GO:0010483	pollen tube reception	IEP	HCCA
CC	GO:0012505	endomembrane system	IEP	HCCA
BP	GO:0015919	peroxisomal membrane transport	IEP	HCCA
MF	GO:0015925	galactosidase activity	IEP	HCCA
MF	GO:0015926	glucosidase activity	IEP	HCCA
BP	GO:0016042	lipid catabolic process	IEP	HCCA
BP	GO:0016054	organic acid catabolic process	IEP	HCCA
BP	GO:0016104	triterpenoid biosynthetic process	IEP	HCCA
BP	GO:0016137	glycoside metabolic process	IEP	HCCA
BP	GO:0016139	glycoside catabolic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
BP	GO:0016558	protein import into peroxisome matrix	IEP	HCCA
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
BP	GO:0019374	galactolipid metabolic process	IEP	HCCA
BP	GO:0019375	galactolipid biosynthetic process	IEP	HCCA
BP	GO:0019377	glycolipid catabolic process	IEP	HCCA
BP	GO:0019395	fatty acid oxidation	IEP	HCCA
BP	GO:0019742	pentacyclic triterpenoid metabolic process	IEP	HCCA
BP	GO:0019745	pentacyclic triterpenoid biosynthetic process	IEP	HCCA
BP	GO:0022411	cellular component disassembly	IEP	HCCA
BP	GO:0030149	sphingolipid catabolic process	IEP	HCCA
BP	GO:0030258	lipid modification	IEP	HCCA
BP	GO:0034440	lipid oxidation	IEP	HCCA
BP	GO:0042631	cellular response to water deprivation	IEP	HCCA
BP	GO:0043574	peroxisomal transport	IEP	HCCA
BP	GO:0044242	cellular lipid catabolic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0044275	cellular carbohydrate catabolic process	IEP	HCCA
BP	GO:0044277	cell wall disassembly	IEP	HCCA
BP	GO:0044282	small molecule catabolic process	IEP	HCCA
BP	GO:0044743	protein transmembrane import into intracellular organelle	IEP	HCCA
BP	GO:0046352	disaccharide catabolic process	IEP	HCCA
BP	GO:0046395	carboxylic acid catabolic process	IEP	HCCA
BP	GO:0046466	membrane lipid catabolic process	IEP	HCCA
BP	GO:0046477	glycosylceramide catabolic process	IEP	HCCA
BP	GO:0046479	glycosphingolipid catabolic process	IEP	HCCA
BP	GO:0046482	para-aminobenzoic acid metabolic process	IEP	HCCA
BP	GO:0046514	ceramide catabolic process	IEP	HCCA
BP	GO:0048364	root development	IEP	HCCA
BP	GO:0048527	lateral root development	IEP	HCCA
BP	GO:0048528	post-embryonic root development	IEP	HCCA
MF	GO:0051119	sugar transmembrane transporter activity	IEP	HCCA
BP	GO:0051703	biological process involved in intraspecies interaction between organisms	IEP	HCCA
MF	GO:0070704	sterol desaturase activity	IEP	HCCA
BP	GO:0071229	cellular response to acid chemical	IEP	HCCA
BP	GO:0071462	cellular response to water stimulus	IEP	HCCA
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	HCCA
BP	GO:0072662	protein localization to peroxisome	IEP	HCCA
BP	GO:0072663	establishment of protein localization to peroxisome	IEP	HCCA
BP	GO:0080183	response to photooxidative stress	IEP	HCCA
BP	GO:0090421	embryonic meristem initiation	IEP	HCCA
MF	GO:0090599	alpha-glucosidase activity	IEP	HCCA
BP	GO:0090693	plant organ senescence	IEP	HCCA
BP	GO:0090696	post-embryonic plant organ development	IEP	HCCA
BP	GO:0099402	plant organ development	IEP	HCCA
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA
BP	GO:1901657	glycosyl compound metabolic process	IEP	HCCA
BP	GO:1901658	glycosyl compound catabolic process	IEP	HCCA
BP	GO:1903509	liposaccharide metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006702	CASP_dom	24	176

External Links

No external refs found!

AT4G15610

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation