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AT4G15420


Description : Ubiquitin fusion degradation UFD1 family protein


Gene families : OG0008220 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008220_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G15420

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene57736.t1 Aspi01Gene57736 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g35040.1 LOC_Os01g35040 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Nbi_g01186 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07531 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR004854 Ufd1-like 90 251
No external refs found!