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  5. AT4G15060

AT4G15060


Description : CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G55660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG0004270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004270_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G15060
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
AT1G22000 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.08 OrthoFinder output from all 47 species
AT1G55030 No alias RNI-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G10750 No alias FBD domain family 0.01 OrthoFinder output from all 47 species
AT3G49020 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.01 OrthoFinder output from all 47 species
AT3G53550 No alias FBD-like domain family protein 0.01 OrthoFinder output from all 47 species
AT4G00315 No alias F-box/RNI-like/FBD-like domains-containing protein 0.02 OrthoFinder output from all 47 species
AT4G26350 No alias F-box/RNI-like/FBD-like domains-containing protein 0.02 OrthoFinder output from all 47 species
AT5G40750 No alias FBD / Leucine Rich Repeat domains containing protein 0.01 OrthoFinder output from all 47 species
AT5G56390 No alias F-box/RNI-like/FBD-like domains-containing protein 0.02 OrthoFinder output from all 47 species
AT5G56560 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 325 350
IPR006566 FBD 104 147
IPR001810 F-box_dom 173 208
No external refs found!