AT4G14870 (SECE1)

Aliases : SECE1

Description : secE/sec61-gamma protein transport protein

Gene families : OG0007405 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007405_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G14870

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00025p00209580	SECE1,...	Protein translocation.chloroplast.thylakoid membrane...	0.03	OrthoFinder output from all 47 species
Ala_g05942	SECE1	component *(SecE1) of thylakoid membrane Sec1...	0.07	OrthoFinder output from all 47 species
Als_g10692	SECE1	component *(SecE1) of thylakoid membrane Sec1...	0.05	OrthoFinder output from all 47 species
Aop_g04815	SECE1	component *(SecE1) of thylakoid membrane Sec1...	0.02	OrthoFinder output from all 47 species
Cre10.g457650	No alias	Protein translocation.chloroplast.thylakoid membrane...	0.06	OrthoFinder output from all 47 species
Ehy_g13662	SECE1	component *(SecE1) of thylakoid membrane Sec1...	0.05	OrthoFinder output from all 47 species
Mp4g13960.1	SECE1	component SecE1 of thylakoid membrane Sec1 translocation system	0.02	OrthoFinder output from all 47 species
Nbi_g01748	SECE1	component *(SecE1) of thylakoid membrane Sec1...	0.04	OrthoFinder output from all 47 species
Pir_g61455	SECE1	component *(SecE1) of thylakoid membrane Sec1...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008344	SECE1	component *(SecE1) of thylakoid membrane Sec1...	0.03	OrthoFinder output from all 47 species
Spa_g07161	SECE1	component *(SecE1) of thylakoid membrane Sec1...	0.06	OrthoFinder output from all 47 species
Tin_g13926	SECE1	component *(SecE1) of thylakoid membrane Sec1...	0.04	OrthoFinder output from all 47 species
Zm00001e036355_P002	SECE1, Zm00001e036355	component SecE1 of thylakoid membrane Sec1 translocation system	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009668	plastid membrane organization	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010027	thylakoid membrane organization	ISS	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
CC	GO:0019867	outer membrane	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031968	organelle outer membrane	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0061024	membrane organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000023	maltose metabolic process	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006098	pentose-phosphate shunt	IEP	HCCA
BP	GO:0006739	NADP metabolic process	IEP	HCCA
BP	GO:0006740	NADPH regeneration	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
CC	GO:0009295	nucleoid	IEP	HCCA
CC	GO:0009508	plastid chromosome	IEP	HCCA
CC	GO:0009526	plastid envelope	IEP	HCCA
CC	GO:0009534	chloroplast thylakoid	IEP	HCCA
CC	GO:0009544	chloroplast ATP synthase complex	IEP	HCCA
CC	GO:0009579	thylakoid	IEP	HCCA
BP	GO:0009767	photosynthetic electron transport chain	IEP	HCCA
CC	GO:0009941	chloroplast envelope	IEP	HCCA
BP	GO:0015994	chlorophyll metabolic process	IEP	HCCA
BP	GO:0015995	chlorophyll biosynthetic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
BP	GO:0016556	mRNA modification	IEP	HCCA
BP	GO:0019252	starch biosynthetic process	IEP	HCCA
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
CC	GO:0031967	organelle envelope	IEP	HCCA
CC	GO:0031975	envelope	IEP	HCCA
CC	GO:0031976	plastid thylakoid	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
MF	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	IEP	HCCA
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	HCCA
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	HCCA
CC	GO:0098807	chloroplast thylakoid membrane protein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001901	Translocase_SecE/Sec61-g	114	162

External Links

No external refs found!

AT4G14870 (SECE1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation