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  5. AT4G14368

AT4G14368


Description : Regulator of chromosome condensation (RCC1) family protein


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G14368
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AT3G23270 No alias Regulator of chromosome condensation (RCC1) family with... 0.04 OrthoFinder output from all 47 species
Als_g04496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32427 No alias regulatory protein *(RLD) of gravity sensing & original... 0.02 OrthoFinder output from all 47 species
Ceric.09G040000.1 Ceric.09G040000 not classified & original description: pacid=50586756... 0.02 OrthoFinder output from all 47 species
Dac_g09907 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18130 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01020014001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.05 OrthoFinder output from all 47 species
LOC_Os01g50470.1 LOC_Os01g50470 PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
LOC_Os05g31920.2 LOC_Os05g31920 PH, RCC1 and FYVE domains-containing protein 1... 0.05 OrthoFinder output from all 47 species
LOC_Os05g46740.1 LOC_Os05g46740 PH, RCC1 and FYVE domains-containing protein 1... 0.05 OrthoFinder output from all 47 species
Ore_g08372 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g005590.2.1 Solyc03g005590 PH, RCC1 and FYVE domains-containing protein 1... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005794 Golgi apparatus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004439 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005768 endosome IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
CC GO:0009504 cell plate IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032957 inositol trisphosphate metabolic process IEP HCCA
MF GO:0034593 phosphatidylinositol bisphosphate phosphatase activity IEP HCCA
MF GO:0034595 phosphatidylinositol phosphate 5-phosphatase activity IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
BP GO:0048868 pollen tube development IEP HCCA
MF GO:0052866 phosphatidylinositol phosphate phosphatase activity IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
MF GO:0106019 phosphatidylinositol-4,5-bisphosphate phosphatase activity IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 614 680
IPR001849 PH_domain 21 128
IPR013591 Brevis_radix_dom 964 994
IPR027988 BRX_N 854 888
IPR000408 Reg_chr_condens 460 506
IPR000408 Reg_chr_condens 509 558
IPR000408 Reg_chr_condens 289 337
IPR000408 Reg_chr_condens 563 607
IPR000408 Reg_chr_condens 340 391
IPR000408 Reg_chr_condens 395 444
No external refs found!