AT4G14360

Description : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Gene families : OG0003621 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003621_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G14360
Cluster	HCCA: Cluster_82

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00067p00071280	evm_27.TU.AmTr_v1...	Probable methyltransferase PMT3 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT5G14430	No alias	S-adenosyl-L-methionine-dependent methyltransferases...	0.04	OrthoFinder output from all 47 species
Aev_g04124	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g61692	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0934.g093097	No alias	not classified & original description: CDS=1-1923	0.04	OrthoFinder output from all 47 species
Ceric.03G077500.1	Ceric.03G077500	not classified & original description: pacid=50571534...	0.12	OrthoFinder output from all 47 species
Dac_g27368	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g09996	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g09427	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g06036	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01027829001	No alias	Probable methyltransferase PMT3 OS=Arabidopsis thaliana	0.09	OrthoFinder output from all 47 species
LOC_Os10g33720.1	LOC_Os10g33720	Probable methyltransferase PMT1 OS=Arabidopsis thaliana...	0.11	OrthoFinder output from all 47 species
Lfl_g04094	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Mp6g01780.1	No alias	Probable methyltransferase PMT1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Nbi_g09078	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g16784	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g37939	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Smo93209	No alias	Probable methyltransferase PMT3 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
Solyc03g005600.3.1	Solyc03g005600	Probable methyltransferase PMT8 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
Solyc09g090190.3.1	Solyc09g090190	Probable methyltransferase PMT8 OS=Arabidopsis thaliana...	0.07	OrthoFinder output from all 47 species
Tin_g09324	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e004577_P001	Zm00001e004577	Probable methyltransferase PMT8 OS=Arabidopsis thaliana...	0.09	OrthoFinder output from all 47 species
Zm00001e012692_P001	Zm00001e012692	Probable methyltransferase PMT8 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	RCA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005768	endosome	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	ISM	Interproscan
CC	GO:0005802	trans-Golgi network	IDA	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
CC	GO:0009506	plasmodesma	IDA	Interproscan
BP	GO:0009664	plant-type cell wall organization	RCA	Interproscan
BP	GO:0009832	plant-type cell wall biogenesis	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0042546	cell wall biogenesis	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000103	sulfate assimilation	IEP	HCCA
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0004335	galactokinase activity	IEP	HCCA
MF	GO:0004779	sulfate adenylyltransferase activity	IEP	HCCA
MF	GO:0004781	sulfate adenylyltransferase (ATP) activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
CC	GO:0005774	vacuolar membrane	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
BP	GO:0009225	nucleotide-sugar metabolic process	IEP	HCCA
BP	GO:0009226	nucleotide-sugar biosynthetic process	IEP	HCCA
BP	GO:0009825	multidimensional cell growth	IEP	HCCA
BP	GO:0009970	cellular response to sulfate starvation	IEP	HCCA
BP	GO:0010289	homogalacturonan biosynthetic process	IEP	HCCA
BP	GO:0010393	galacturonan metabolic process	IEP	HCCA
BP	GO:0010394	homogalacturonan metabolic process	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0019200	carbohydrate kinase activity	IEP	HCCA
BP	GO:0030243	cellulose metabolic process	IEP	HCCA
BP	GO:0030244	cellulose biosynthetic process	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0042350	GDP-L-fucose biosynthetic process	IEP	HCCA
BP	GO:0042352	GDP-L-fucose salvage	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043173	nucleotide salvage	IEP	HCCA
BP	GO:0043473	pigmentation	IEP	HCCA
BP	GO:0043476	pigment accumulation	IEP	HCCA
BP	GO:0043478	pigment accumulation in response to UV light	IEP	HCCA
BP	GO:0043479	pigment accumulation in tissues in response to UV light	IEP	HCCA
BP	GO:0043480	pigment accumulation in tissues	IEP	HCCA
BP	GO:0043481	anthocyanin accumulation in tissues in response to UV light	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
BP	GO:0045488	pectin metabolic process	IEP	HCCA
BP	GO:0045489	pectin biosynthetic process	IEP	HCCA
BP	GO:0046368	GDP-L-fucose metabolic process	IEP	HCCA
MF	GO:0047262	polygalacturonate 4-alpha-galacturonosyltransferase activity	IEP	HCCA
MF	GO:0047341	fucose-1-phosphate guanylyltransferase activity	IEP	HCCA
MF	GO:0050201	fucokinase activity	IEP	HCCA
BP	GO:0051274	beta-glucan biosynthetic process	IEP	HCCA
BP	GO:0052325	cell wall pectin biosynthetic process	IEP	HCCA
BP	GO:0052546	cell wall pectin metabolic process	IEP	HCCA
MF	GO:0070566	adenylyltransferase activity	IEP	HCCA
MF	GO:0070568	guanylyltransferase activity	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004159	Put_SAM_MeTrfase	85	595

External Links

No external refs found!

AT4G14360

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation