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Description : BEST Arabidopsis thaliana protein match is: dehydration-induced protein (ERD15) (TAIR:AT2G41430.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Gene families : OG0001062 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001062_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT4G14270 | |
| Cluster | HCCA: Cluster_152 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Als_g45236 | ERD15, LSR1, CID1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g07257 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g23010.1 | ERD15, LSR1,... | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g46670.2 | ERD15, LSR1,... | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g47653 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g28054 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0059.g015156 | No alias | not classified & original description: CDS=1-333 | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g37988 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e035777_P001 | ERD15, LSR1,... | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000156 | phosphorelay response regulator activity | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005783 | endoplasmic reticulum | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006346 | DNA methylation-dependent heterochromatin formation | IEP | HCCA |
| BP | GO:0006482 | protein demethylation | IEP | HCCA |
| BP | GO:0006487 | protein N-linked glycosylation | IEP | HCCA |
| BP | GO:0008214 | protein dealkylation | IEP | HCCA |
| CC | GO:0009528 | plastid inner membrane | IEP | HCCA |
| BP | GO:0009560 | embryo sac egg cell differentiation | IEP | HCCA |
| BP | GO:0009791 | post-embryonic development | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0009908 | flower development | IEP | HCCA |
| BP | GO:0010020 | chloroplast fission | IEP | HCCA |
| BP | GO:0010114 | response to red light | IEP | HCCA |
| BP | GO:0010218 | response to far red light | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| CC | GO:0016514 | SWI/SNF complex | IEP | HCCA |
| BP | GO:0016577 | histone demethylation | IEP | HCCA |
| CC | GO:0019866 | organelle inner membrane | IEP | HCCA |
| BP | GO:0022414 | reproductive process | IEP | HCCA |
| BP | GO:0031048 | RNA-mediated heterochromatin formation | IEP | HCCA |
| MF | GO:0031490 | chromatin DNA binding | IEP | HCCA |
| MF | GO:0032451 | demethylase activity | IEP | HCCA |
| MF | GO:0032452 | histone demethylase activity | IEP | HCCA |
| MF | GO:0032454 | histone H3K9 demethylase activity | IEP | HCCA |
| BP | GO:0032776 | DNA methylation on cytosine | IEP | HCCA |
| BP | GO:0033169 | histone H3-K9 demethylation | IEP | HCCA |
| BP | GO:0040029 | epigenetic regulation of gene expression | IEP | HCCA |
| BP | GO:0042752 | regulation of circadian rhythm | IEP | HCCA |
| BP | GO:0043572 | plastid fission | IEP | HCCA |
| MF | GO:0043621 | protein self-association | IEP | HCCA |
| BP | GO:0048285 | organelle fission | IEP | HCCA |
| BP | GO:0048571 | long-day photoperiodism | IEP | HCCA |
| BP | GO:0048574 | long-day photoperiodism, flowering | IEP | HCCA |
| BP | GO:0051170 | import into nucleus | IEP | HCCA |
| MF | GO:0060089 | molecular transducer activity | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0070076 | histone lysine demethylation | IEP | HCCA |
| CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | HCCA |
| BP | GO:0070988 | demethylation | IEP | HCCA |
| BP | GO:0080188 | gene silencing by RNA-directed DNA methylation | IEP | HCCA |
| BP | GO:0090567 | reproductive shoot system development | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140457 | protein demethylase activity | IEP | HCCA |
| BP | GO:0140718 | facultative heterochromatin formation | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| CC | GO:1904949 | ATPase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |