AT4G14210 (PDS3, PDS, PDE226)


Aliases : PDS3, PDS, PDE226

Description : phytoene desaturase 3


Gene families : OG0006245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006245_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G14210

Target Alias Description ECC score Gene Family Method Actions
Aev_g13760 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09707 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01360 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g36080 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G066500.1 PDS3, PDS,... phytoene desaturase *(PDS) & original description:... 0.02 OrthoFinder output from all 47 species
Cre12.g509650 PDS3, PDS, PDE226 Secondary metabolism.terpenoids.terpenoid... 0.04 OrthoFinder output from all 47 species
Dde_g23615 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g08570.1 PDS3, PDS,... phytoene desaturase (PDS) 0.05 OrthoFinder output from all 47 species
Len_g09650 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g01859 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17790 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.04 OrthoFinder output from all 47 species
Smo232430 PDS3, PDS, PDE226 Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
Zm00001e000618_P002 PDS3, PDS,... phytoene desaturase (PDS) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009507 chloroplast TAS Interproscan
CC GO:0009534 chloroplast thylakoid IDA Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
BP GO:0010155 regulation of proton transport RCA Interproscan
BP GO:0016117 carotenoid biosynthetic process IDA Interproscan
BP GO:0016120 carotene biosynthetic process IDA Interproscan
MF GO:0016166 phytoene dehydrogenase activity IDA Interproscan
BP GO:0046777 protein autophosphorylation RCA Interproscan
Type GO Term Name Evidence Source
MF GO:0004017 adenylate kinase activity IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
CC GO:0009532 plastid stroma IEP HCCA
CC GO:0009570 chloroplast stroma IEP HCCA
BP GO:0010190 cytochrome b6f complex assembly IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019757 glycosinolate metabolic process IEP HCCA
BP GO:0019758 glycosinolate biosynthetic process IEP HCCA
BP GO:0019760 glucosinolate metabolic process IEP HCCA
BP GO:0019761 glucosinolate biosynthetic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
CC GO:0031977 thylakoid lumen IEP HCCA
BP GO:0045036 protein targeting to chloroplast IEP HCCA
MF GO:0050145 nucleoside monophosphate kinase activity IEP HCCA
BP GO:0072596 establishment of protein localization to chloroplast IEP HCCA
BP GO:0072598 protein localization to chloroplast IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 102 543
No external refs found!