AT4G13050

Description : Acyl-ACP thioesterase

Gene families : OG0000593 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000593_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G13050

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00117p00072000	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid chain...	0.04	OrthoFinder output from all 47 species
Ala_g19789	FATB	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01004951001	FaTA, AtFaTA	Lipid metabolism.fatty acid synthesis.fatty acid chain...	0.11	OrthoFinder output from all 47 species
Gb_22110	FATB	palmitoyl-ACP thioesterase	0.04	OrthoFinder output from all 47 species
Gb_22116	FATB	Palmitoyl-acyl carrier protein thioesterase,...	0.02	OrthoFinder output from all 47 species
LOC_Os09g32760.1	FaTA, AtFaTA,...	oleoyl-ACP thioesterase	0.1	OrthoFinder output from all 47 species
MA_102879g0010	FaTA, AtFaTA	Oleoyl-acyl carrier protein thioesterase 2,...	0.05	OrthoFinder output from all 47 species
Msp_g04489	No alias	oleoyl-ACP thioesterase *(FATA) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g07293	No alias	oleoyl-ACP thioesterase *(FATA) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc06g083380.3.1	Solyc06g083380	oleoyl-ACP thioesterase	0.09	OrthoFinder output from all 47 species
Tin_g10513	No alias	oleoyl-ACP thioesterase *(FATA) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g14754	FaTA, AtFaTA	oleoyl-ACP thioesterase *(FATA) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e010117_P001	FaTA, AtFaTA,...	oleoyl-ACP thioesterase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000036	acyl carrier activity	ISS	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IGI	Interproscan
BP	GO:0006633	fatty acid biosynthetic process	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
MF	GO:0044620	ACP phosphopantetheine attachment site binding	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
MF	GO:0051192	prosthetic group binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140104	molecular carrier activity	None	Extended
MF	GO:0140414	phosphopantetheine-dependent carrier activity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003725	double-stranded RNA binding	IEP	HCCA
MF	GO:0009374	biotin binding	IEP	HCCA
CC	GO:0009526	plastid envelope	IEP	HCCA
CC	GO:0009532	plastid stroma	IEP	HCCA
CC	GO:0009570	chloroplast stroma	IEP	HCCA
BP	GO:0009615	response to virus	IEP	HCCA
CC	GO:0009941	chloroplast envelope	IEP	HCCA
BP	GO:0010267	ta-siRNA processing	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
BP	GO:0030422	siRNA processing	IEP	HCCA
MF	GO:0031406	carboxylic acid binding	IEP	HCCA
CC	GO:0031967	organelle envelope	IEP	HCCA
CC	GO:0031975	envelope	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
MF	GO:0033293	monocarboxylic acid binding	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0035196	miRNA processing	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0043177	organic acid binding	IEP	HCCA
BP	GO:0051607	defense response to virus	IEP	HCCA
BP	GO:0070918	regulatory ncRNA processing	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0140546	defense response to symbiont	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
MF	GO:1901681	sulfur compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002864	Acyl-ACP_thioesterase	82	363

External Links

No external refs found!

AT4G13050

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation