AT4G12460 (ORP2B)

Aliases : ORP2B

Description : OSBP(oxysterol binding protein)-related protein 2B

Gene families : OG0001490 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001490_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G12460

Target	Alias	Description	ECC score	Gene Family Method
Cba_g05317	ORP1C	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.27G007500.1	ORP1C, Ceric.27G007500	not classified & original description: pacid=50605573...	0.03	OrthoFinder output from all 47 species
Dcu_g06451	ORP1C	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Gb_34910	ORP1C	Oxysterol-binding protein-related protein 1C...	0.03	OrthoFinder output from all 47 species
Nbi_g21217	ORP1C	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g13455	ORP1C	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g09027	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g39910	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e039112_P001	ORP2A, Zm00001e039112	Oxysterol-binding protein-related protein 2A...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005496	steroid binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
MF	GO:0008142	oxysterol binding	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	ISS	Interproscan
MF	GO:0008289	lipid binding	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0032934	sterol binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005768	endosome	IEP	HCCA
CC	GO:0005802	trans-Golgi network	IEP	HCCA
BP	GO:0008284	positive regulation of cell population proliferation	IEP	HCCA
CC	GO:0031410	cytoplasmic vesicle	IEP	HCCA
CC	GO:0031982	vesicle	IEP	HCCA
CC	GO:0031984	organelle subcompartment	IEP	HCCA
BP	GO:0042127	regulation of cell population proliferation	IEP	HCCA
CC	GO:0097708	intracellular vesicle	IEP	HCCA
CC	GO:0098791	Golgi apparatus subcompartment	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000648	Oxysterol-bd	323	668

External Links

No external refs found!