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AT4G12390 (PME1)


Aliases : PME1

Description : pectin methylesterase inhibitor 1


Gene families : OG0000683 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000683_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G12390

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00080p00031010 evm_27.TU.AmTr_v1... 21 kDa protein OS=Daucus carota 0.03 OrthoFinder output from all 47 species
Ehy_g06417 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08302 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os10g10620.1 LOC_Os10g10620 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10436535g0010 No alias Pectinesterase inhibitor 11 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
MA_32668g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_5007572g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc03g083770.1.1 Solyc03g083770 21 kDa protein OS=Daucus carota (sp|p17407|21kd_dauca : 143.0) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
BP GO:0010167 response to nitrate RCA Interproscan
BP GO:0015706 nitrate transmembrane transport RCA Interproscan
MF GO:0046910 pectinesterase inhibitor activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006569 tryptophan catabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009074 aromatic amino acid family catabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009683 indoleacetic acid metabolic process IEP HCCA
BP GO:0009684 indoleacetic acid biosynthetic process IEP HCCA
BP GO:0009738 abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009850 auxin metabolic process IEP HCCA
BP GO:0009851 auxin biosynthetic process IEP HCCA
MF GO:0010427 abscisic acid binding IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
BP GO:0019757 glycosinolate metabolic process IEP HCCA
BP GO:0019758 glycosinolate biosynthetic process IEP HCCA
BP GO:0019760 glucosinolate metabolic process IEP HCCA
BP GO:0019761 glucosinolate biosynthetic process IEP HCCA
MF GO:0019840 isoprenoid binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
MF GO:0033293 monocarboxylic acid binding IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0042435 indole-containing compound biosynthetic process IEP HCCA
BP GO:0042436 indole-containing compound catabolic process IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
MF GO:0042562 hormone binding IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
MF GO:0043178 alcohol binding IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0080163 regulation of protein serine/threonine phosphatase activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 38 196
No external refs found!