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  5. AT4G10410

AT4G10410


Description : Leucine-rich repeat (LRR) family protein


Gene families : OG0004270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004270_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G10410

Target Alias Description ECC score Gene Family Method Actions
AT1G05080 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 OrthoFinder output from all 47 species
AT1G55030 No alias RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G49030 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.04 OrthoFinder output from all 47 species
AT3G49480 No alias Protein with RNI-like/FBD-like domains 0.05 OrthoFinder output from all 47 species
AT3G52690 No alias RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G26340 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 OrthoFinder output from all 47 species
AT4G26350 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 OrthoFinder output from all 47 species
AT5G38570 No alias F-box/RNI-like superfamily protein 0.07 OrthoFinder output from all 47 species
AT5G38590 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 OrthoFinder output from all 47 species
AT5G44850 No alias Protein with RNI-like/FBD-like domains 0.04 OrthoFinder output from all 47 species
AT5G56325 No alias FBD-like domain family protein 0.04 OrthoFinder output from all 47 species
AT5G56390 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 OrthoFinder output from all 47 species
AT5G56400 No alias FBD, F-box, Skp2-like and Leucine Rich Repeat domains... 0.04 OrthoFinder output from all 47 species
AT5G56430 No alias F-box/FBD-like domains containing protein 0.04 OrthoFinder output from all 47 species
AT5G56452 No alias FBD-like domain family protein 0.04 OrthoFinder output from all 47 species
AT5G56560 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.03 OrthoFinder output from all 47 species
AT5G62970 No alias Protein with RNI-like/FBD-like domains 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004407 histone deacetylase activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0009910 negative regulation of flower development IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0019213 deacetylase activity IEP HCCA
MF GO:0033558 protein lysine deacetylase activity IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0048440 carpel development IEP HCCA
BP GO:0048581 negative regulation of post-embryonic development IEP HCCA
BP GO:0051241 negative regulation of multicellular organismal process IEP HCCA
BP GO:2000242 negative regulation of reproductive process IEP HCCA

No InterPro domains available for this sequence

No external refs found!