AT4G09990

Description : Protein of unknown function (DUF579)

Gene families : OG0001631 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001631_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G09990

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00050p00186430	evm_27.TU.AmTr_v1...	No description available	0.05	OrthoFinder output from all 47 species
AMTR_s00099p00012720	evm_27.TU.AmTr_v1...	Cell wall.hemicellulose.xylan.modification and...	0.04	OrthoFinder output from all 47 species
AT1G09610	No alias	Protein of unknown function (DUF579)	0.04	OrthoFinder output from all 47 species
AT5G67210	No alias	Protein of unknown function (DUF579)	0.04	OrthoFinder output from all 47 species
Adi_g009283	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g51174	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene38580.t1	Aspi01Gene38580	glucuronoxylan 4-O-methyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene65837.t1	Aspi01Gene65837	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0170.g055595	No alias	not classified & original description: CDS=1-903	0.03	OrthoFinder output from all 47 species
Azfi_s0280.g062300	No alias	not classified & original description: CDS=1-879	0.05	OrthoFinder output from all 47 species
Dac_g00741	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g02681	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g43175	No alias	glucuronoxylan 4-O-methyltransferase & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g38768	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01023221001	No alias	Glucuronoxylan 4-O-methyltransferase 3 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
LOC_Os02g06380.1	LOC_Os02g06380	Protein IRX15-LIKE OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
LOC_Os04g55640.1	LOC_Os04g55640	Protein IRX15-LIKE OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
LOC_Os11g13870.1	LOC_Os11g13870	Glucuronoxylan 4-O-methyltransferase 2 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
LOC_Os12g10320.1	LOC_Os12g10320	glucuronoxylan 4-O-methyltransferase	0.04	OrthoFinder output from all 47 species
Len_g30914	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Len_g35377	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_10430239g0010	No alias	glucuronoxylan 4-O-methyltransferase	0.04	OrthoFinder output from all 47 species
MA_195978g0010	No alias	Probable methyltransferase At1g27930 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Nbi_g27137	No alias	glucuronoxylan 4-O-methyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g29128	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c16_5380V3.1	Pp3c16_5380	Protein of unknown function (DUF579)	0.02	OrthoFinder output from all 47 species
Ppi_g14749	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006205	No alias	glucuronoxylan 4-O-methyltransferase & original...	0.02	OrthoFinder output from all 47 species
Smo57632	No alias	Glucuronoxylan 4-O-methyltransferase 1 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Solyc01g103360.4.1	Solyc01g103360	glucuronoxylan 4-O-methyltransferase	0.04	OrthoFinder output from all 47 species
Solyc02g064945.1.1	Solyc02g064945	Protein IRX15-LIKE OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Solyc05g015497.1.1	Solyc05g015497	Probable methyltransferase At1g27930 OS=Arabidopsis...	0.06	OrthoFinder output from all 47 species
Solyc11g031950.1.1	Solyc11g031950	glucuronoxylan 4-O-methyltransferase	0.06	OrthoFinder output from all 47 species
Spa_g24624	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g30525	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g06911	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e011047_P001	Zm00001e011047	Glucuronoxylan 4-O-methyltransferase 2 OS=Arabidopsis...	0.06	OrthoFinder output from all 47 species
Zm00001e013688_P001	Zm00001e013688	Protein IRX15-LIKE OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
Zm00001e039770_P002	Zm00001e039770	glucuronoxylan 4-O-methyltransferase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010053	root epidermal cell differentiation	None	Extended
BP	GO:0010054	trichoblast differentiation	RCA	Interproscan
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010410	hemicellulose metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
MF	GO:0030775	glucuronoxylan 4-O-methyltransferase activity	IDA	Interproscan
BP	GO:0032502	developmental process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0045491	xylan metabolic process	IMP	Interproscan
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0009698	phenylpropanoid metabolic process	IEP	HCCA
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	HCCA
BP	GO:0009806	lignan metabolic process	IEP	HCCA
BP	GO:0009807	lignan biosynthetic process	IEP	HCCA
BP	GO:0019748	secondary metabolic process	IEP	HCCA
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR021148	Polysacc_synth_dom	85	268

External Links

No external refs found!

AT4G09990

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation