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  5. AT4G09190

AT4G09190


Description : F-box and associated interaction domains-containing protein


Gene families : OG0001988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001988_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G09190

Target Alias Description ECC score Gene Family Method Actions
AT1G23037 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from all 47 species
AT1G30790 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT1G30925 No alias phospholipase Cs 0.04 OrthoFinder output from all 47 species
AT1G32660 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT1G33010 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT1G46840 No alias F-box family protein 0.06 OrthoFinder output from all 47 species
AT1G53815 No alias F-box family protein 0.03 OrthoFinder output from all 47 species
AT1G55070 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT1G60370 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT1G67130 No alias F-box family protein 0.05 OrthoFinder output from all 47 species
AT2G16810 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT2G32470 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT3G47150 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT3G52320 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT4G19930 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT4G38870 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT5G15670 No alias F-box family protein 0.02 OrthoFinder output from all 47 species
AT5G18160 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT5G38810 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT5G44345 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from all 47 species
AT5G65850 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 22 58
IPR013187 F-box-assoc_dom_typ3 209 318
No external refs found!