AT4G08670

Description : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein

Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G08670

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00204620	evm_27.TU.AmTr_v1...	Cell wall.cell wall proteins.hydroxyproline-rich...	0.03	OrthoFinder output from all 47 species
AT1G36150	No alias	Bifunctional inhibitor/lipid-transfer protein/seed...	0.06	OrthoFinder output from all 47 species
AT1G73560	No alias	Bifunctional inhibitor/lipid-transfer protein/seed...	0.04	OrthoFinder output from all 47 species
Ala_g38941	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g02877	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g14616	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g37270	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01001178001	No alias	Cell wall.cell wall proteins.hydroxyproline-rich...	0.03	OrthoFinder output from all 47 species
GSVIVT01001181001	EDA4	No description available	0.03	OrthoFinder output from all 47 species
GSVIVT01018010001	No alias	No description available	0.03	OrthoFinder output from all 47 species
GSVIVT01029796001	No alias	Cell wall.cell wall proteins.hydroxyproline-rich...	0.04	OrthoFinder output from all 47 species
Gb_13133	No alias	xylogen-type arabinogalactan protein	0.03	OrthoFinder output from all 47 species
LOC_Os01g59870.1	LOC_Os01g59870	xylogen-type arabinogalactan protein	0.03	OrthoFinder output from all 47 species
LOC_Os06g49770.1	LOC_Os06g49770	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Len_g37455	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Mp1g22240.1	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Mp8g18180.1	No alias	xylogen-type arabinogalactan protein	0.03	OrthoFinder output from all 47 species
Ore_g28932	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c11_11470V3.1	Pp3c11_11470	Bifunctional inhibitor/lipid-transfer protein/seed...	0.01	OrthoFinder output from all 47 species
Sam_g02332	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g25113	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g30752	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e022825_P001	Zm00001e022825	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006869	lipid transport	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008289	lipid binding	ISS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010208	pollen wall assembly	None	Extended
BP	GO:0010584	pollen exine formation	RCA	Interproscan
BP	GO:0010927	cellular component assembly involved in morphogenesis	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0031225	obsolete anchored component of membrane	TAS	Interproscan
BP	GO:0032502	developmental process	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	HCCA
MF	GO:0004396	hexokinase activity	IEP	HCCA
MF	GO:0005337	nucleoside transmembrane transporter activity	IEP	HCCA
MF	GO:0005372	water transmembrane transporter activity	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
CC	GO:0005795	Golgi stack	IEP	HCCA
BP	GO:0009555	pollen development	IEP	HCCA
BP	GO:0009786	regulation of asymmetric cell division	IEP	HCCA
BP	GO:0009894	regulation of catabolic process	IEP	HCCA
MF	GO:0015250	water channel activity	IEP	HCCA
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	HCCA
MF	GO:0016211	ammonia ligase activity	IEP	HCCA
BP	GO:0016226	iron-sulfur cluster assembly	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	HCCA
MF	GO:0019200	carbohydrate kinase activity	IEP	HCCA
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	HCCA
BP	GO:0031329	regulation of cellular catabolic process	IEP	HCCA
BP	GO:0048229	gametophyte development	IEP	HCCA
BP	GO:0051302	regulation of cell division	IEP	HCCA
BP	GO:0060211	regulation of nuclear-transcribed mRNA poly(A) tail shortening	IEP	HCCA
BP	GO:0061013	regulation of mRNA catabolic process	IEP	HCCA
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	HCCA
BP	GO:1903311	regulation of mRNA metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR016140	Bifunc_inhib/LTP/seed_store	42	125

External Links

No external refs found!

AT4G08670

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation