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  5. AT4G07960

AT4G07960 (ATCSLC12, CSLC12)


Aliases : ATCSLC12, CSLC12

Description : Cellulose-synthase-like C12


Gene families : OG0000269 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000269_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G07960
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00246770 CSLC6, ATCSLC06,... Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.02 OrthoFinder output from all 47 species
AT3G56000 ATCSLA14, CSLA14 cellulose synthase like A14 0.03 OrthoFinder output from all 47 species
AT4G16590 ATCSLA1, ATCSLA01, CSLA01 cellulose synthase-like A01 0.04 OrthoFinder output from all 47 species
Adi_g014793 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g021713 ATCSLA9, RAT4,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g023296 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g059909 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g079715 ATCSLC12, CSLC12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g084787 CSLA02, ATCSLA2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085019 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g100989 ATCSLC12, CSLC12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109522 ATCSLC04,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18146 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02357 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24097 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09556 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09557 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12570 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50849 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11092 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51376.t1 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000681 ATCSLC8, ATCSLC08, CSLC08 EC_2.4 glycosyltransferase & original description: CDS=1105-3207 0.03 OrthoFinder output from all 47 species
Azfi_s0141.g051312 CSLA02, ATCSLA2,... not classified & original description: CDS=1-639 0.05 OrthoFinder output from all 47 species
Cba_g15797 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17036 ATCSLC05,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38985 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G046900.1 ATCSLC05,... EC_2.4 glycosyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z016500.1 ATCSLC05,... EC_2.4 glycosyltransferase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.31G026800.1 ATCSLC05,... EC_2.4 glycosyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Cre06.g268550 CSLA07,... Enzyme classification.EC_2 transferases.EC_2.4... 0.01 OrthoFinder output from all 47 species
Dac_g01632 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18038 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06421 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07663 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10121 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07706 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03800 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03846 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03982 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06102 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06139 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08603 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14276 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01002010001 CSLC6, ATCSLC06,... Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01031405001 CSLA02, ATCSLA2,... Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.03 OrthoFinder output from all 47 species
GSVIVT01033168001 ATCSLC05,... Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01034719001 ATCSLA9, RAT4,... Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.03 OrthoFinder output from all 47 species
Gb_05418 ATCSLC8, ATCSLC08, CSLC08 1,4-beta-glucan synthase (CSLC) 0.03 OrthoFinder output from all 47 species
Gb_21966 ATCSLA9, RAT4,... mannan synthase (CSLA) 0.03 OrthoFinder output from all 47 species
Gb_28041 ATCSLA9, RAT4,... Glucomannan 4-beta-mannosyltransferase 9 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g09930.1 CSLA02, ATCSLA2,... mannan synthase (CSLA) 0.02 OrthoFinder output from all 47 species
LOC_Os03g07350.1 ATCSLA9, RAT4,... mannan synthase (CSLA) 0.02 OrthoFinder output from all 47 species
LOC_Os07g03260.1 ATCSLC12,... 1,4-beta-glucan synthase (CSLC) 0.02 OrthoFinder output from all 47 species
Len_g09480 ATCSLA3, CSLA03,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15192 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g20739 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07369 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09459 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10426467g0010 ATCSLA9, RAT4,... Glucomannan 4-beta-mannosyltransferase 9 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10431741g0020 ATCSLC12, CSLC12 1,4-beta-glucan synthase (CSLC) 0.02 OrthoFinder output from all 47 species
MA_10432355g0010 CSLC6, ATCSLC06,... Probable xyloglucan glycosyltransferase 3 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Mp1g22770.1 ATCSLA9, RAT4,... mannan synthase (CSLA) 0.02 OrthoFinder output from all 47 species
Msp_g05368 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04426 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06772 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22519 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19517 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28167 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29776 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01004 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01317 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14248 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g49754 ATCSLC8, ATCSLC08, CSLC08 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26243 No alias EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26245 No alias EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Smo230176 ATCSLA9, RAT4,... Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.02 OrthoFinder output from all 47 species
Solyc02g089640.3.1 ATCSLC04,... 1,4-beta-glucan synthase (CSLC) 0.04 OrthoFinder output from all 47 species
Solyc10g083670.3.1 ATCSLA9, RAT4,... mannan synthase (CSLA) 0.04 OrthoFinder output from all 47 species
Spa_g12503 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45654 ATCSLC05,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48005 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56359 CSLC6, ATCSLC06,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04704 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21002 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e032112_P001 ATCSLC12,... 1,4-beta-glucan synthase (CSLC) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005794 Golgi apparatus ISM Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
MF GO:0016757 glycosyltransferase activity ISS Interproscan
MF GO:0016759 cellulose synthase activity ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0001558 regulation of cell growth IEP HCCA
BP GO:0002238 response to molecule of fungal origin IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004623 phospholipase A2 activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
CC GO:0009527 plastid outer membrane IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
CC GO:0009707 chloroplast outer membrane IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009846 pollen germination IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0010119 regulation of stomatal movement IEP HCCA
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP HCCA
MF GO:0015301 obsolete anion:anion antiporter activity IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
BP GO:0030307 positive regulation of cell growth IEP HCCA
MF GO:0035250 UDP-galactosyltransferase activity IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0042284 sphingolipid delta-4 desaturase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
CC GO:0042995 cell projection IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
MF GO:0046509 1,2-diacylglycerol 3-beta-galactosyltransferase activity IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048868 pollen tube development IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
BP GO:0051017 actin filament bundle assembly IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0061572 actin filament bundle organization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0080092 regulation of pollen tube growth IEP HCCA
CC GO:0090406 pollen tube IEP HCCA
CC GO:0120025 plasma membrane bounded cell projection IEP HCCA
InterPro domains Description Start Stop
IPR001173 Glyco_trans_2-like 335 537
No external refs found!