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  5. AT4G04980

AT4G04980


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11070.1); Has 23100 Blast hits to 15699 proteins in 1063 species: Archae - 116; Bacteria - 2262; Metazoa - 8308; Fungi - 3268; Plants - 3181; Viruses - 958; Other Eukaryotes - 5007 (source: NCBI BLink).


Gene families : OG0002918 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002918_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G04980
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Als_g51710 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene03298.t1 Aspi01Gene03298 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56553.t2 Aspi01Gene56553 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01950 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01007119001 No alias Uncharacterized protein At4g04980 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01030542001 No alias Uncharacterized protein At4g04980 OS=Arabidopsis thaliana 0.13 OrthoFinder output from all 47 species
MA_103286g0020 No alias Uncharacterized protein At4g04980 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g14991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18065 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0185.g025036 No alias not classified & original description: CDS=1-2685 0.03 OrthoFinder output from all 47 species
Sam_g24886 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g078660.4.1 Solyc02g078660 Uncharacterized protein At4g04980 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc03g006530.3.1 Solyc03g006530 Uncharacterized protein At4g04980 OS=Arabidopsis... 0.14 OrthoFinder output from all 47 species
Solyc10g009140.3.1 Solyc10g009140 Uncharacterized protein At4g04980 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Spa_g54907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023658_P001 Zm00001e023658 Uncharacterized protein At4g04980 OS=Arabidopsis... 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004683 calmodulin-dependent protein kinase activity IEP HCCA
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
MF GO:0005451 obsolete monoatomic cation:proton antiporter activity IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006814 sodium ion transport IEP HCCA
BP GO:0006935 chemotaxis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0010183 pollen tube guidance IEP HCCA
BP GO:0010351 lithium ion transport IEP HCCA
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP HCCA
BP GO:0010959 regulation of metal ion transport IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0015804 neutral amino acid transport IEP HCCA
BP GO:0015824 proline transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
CC GO:0030427 site of polarized growth IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0035838 growing cell tip IEP HCCA
BP GO:0040011 locomotion IEP HCCA
BP GO:0042330 taxis IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
CC GO:0042995 cell projection IEP HCCA
BP GO:0043266 regulation of potassium ion transport IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0048868 pollen tube development IEP HCCA
BP GO:0050918 positive chemotaxis IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
BP GO:0051017 actin filament bundle assembly IEP HCCA
CC GO:0051286 cell tip IEP HCCA
CC GO:0060187 cell pole IEP HCCA
BP GO:0061572 actin filament bundle organization IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0080092 regulation of pollen tube growth IEP HCCA
CC GO:0090404 pollen tube tip IEP HCCA
CC GO:0090406 pollen tube IEP HCCA
CC GO:0120025 plasma membrane bounded cell projection IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901016 regulation of potassium ion transmembrane transporter activity IEP HCCA
BP GO:1901379 regulation of potassium ion transmembrane transport IEP HCCA
BP GO:1901979 regulation of inward rectifier potassium channel activity IEP HCCA
BP GO:1904062 regulation of monoatomic cation transmembrane transport IEP HCCA
BP GO:2001257 regulation of cation channel activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!