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  5. AT4G04690

AT4G04690


Description : F-box and associated interaction domains-containing protein


Gene families : OG0001907 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001907_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G04690

Target Alias Description ECC score Gene Family Method Actions
AT1G11810 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from all 47 species
AT1G77650 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from all 47 species
AT2G04920 No alias F-box and associated interaction domains-containing protein 0.12 OrthoFinder output from all 47 species
AT3G08750 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G10430 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT3G13830 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT3G17265 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT3G17620 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT3G18330 No alias F-box family protein 0.01 OrthoFinder output from all 47 species
AT3G20030 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT3G22421 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT3G22720 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT3G22730 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT3G24580 No alias F-box and associated interaction domains-containing protein 0.11 OrthoFinder output from all 47 species
AT3G24700 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G49520 No alias F-box and associated interaction domains-containing protein 0.11 OrthoFinder output from all 47 species
AT4G17200 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT5G25195 No alias No description available 0.07 OrthoFinder output from all 47 species
AT5G41490 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process TAS Interproscan
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Type GO Term Name Evidence Source
BP GO:0001558 regulation of cell growth IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-templated DNA replication IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0022604 regulation of cell morphogenesis IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0035966 response to topologically incorrect protein IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051510 regulation of unidimensional cell growth IEP HCCA
BP GO:0051788 response to misfolded protein IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 10 47
IPR006527 F-box-assoc_dom_typ1 199 372
No external refs found!