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  5. AT4G04110

AT4G04110


Description : Toll-Interleukin-Resistance (TIR) domain family protein


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G04110
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00118900 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.03 OrthoFinder output from all 47 species
GSVIVT01026099001 No alias External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
GSVIVT01036304001 No alias External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
Gb_12319 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_497369g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
MA_705541g0010 CSA1 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Nbi_g37534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e035278_P001 Zm00001e035278 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006952 defense response ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001708 cell fate specification IEP HCCA
MF GO:0005345 purine nucleobase transmembrane transporter activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006863 purine nucleobase transport IEP HCCA
BP GO:0009913 epidermal cell differentiation IEP HCCA
MF GO:0015205 nucleobase transmembrane transporter activity IEP HCCA
BP GO:0015851 nucleobase transport IEP HCCA
BP GO:0030855 epithelial cell differentiation IEP HCCA
BP GO:0032880 regulation of protein localization IEP HCCA
BP GO:0045168 cell-cell signaling involved in cell fate commitment IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:0048629 trichome patterning IEP HCCA
BP GO:0060341 regulation of cellular localization IEP HCCA
InterPro domains Description Start Stop
IPR000157 TIR_dom 45 210
No external refs found!