AT4G04020 (FIB)

Aliases : FIB

Description : fibrillin

Gene families : OG0002240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002240_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G04020

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00122150	evm_27.TU.AmTr_v1...	Light-induced protein, chloroplastic OS=Solanum tuberosum	0.03	OrthoFinder output from all 47 species
AMTR_s00028p00216930	evm_27.TU.AmTr_v1...	Light-induced protein, chloroplastic OS=Solanum tuberosum	0.02	OrthoFinder output from all 47 species
Als_g48003	FIB	Fibrillin plastoglobule core protein *(FBN1/2) &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene48670.t1	FIB, Aspi01Gene48670	Fibrillin plastoglobule core protein *(FBN1/2) &...	0.03	OrthoFinder output from all 47 species
Dcu_g09378	No alias	Fibrillin plastoglobule core protein *(FBN1/2) &...	0.01	OrthoFinder output from all 47 species
Gb_21445	No alias	Plastid lipid-associated protein 3, chloroplastic...	0.02	OrthoFinder output from all 47 species
Mp4g14500.1	No alias	Probable plastid-lipid-associated protein 2,...	0.01	OrthoFinder output from all 47 species
Msp_g06412	FIB	Fibrillin plastoglobule core protein *(FBN1/2) &...	0.03	OrthoFinder output from all 47 species
Msp_g09485	No alias	Fibrillin plastoglobule core protein *(FBN1/2) &...	0.04	OrthoFinder output from all 47 species
Ore_g45290	No alias	Fibrillin plastoglobule core protein *(FBN1/2) &...	0.03	OrthoFinder output from all 47 species
Solyc02g081170.4.1	FIB, Solyc02g081170	Light-induced protein, chloroplastic OS=Solanum...	0.07	OrthoFinder output from all 47 species
Solyc08g005220.4.1	Solyc08g005220	Probable plastid-lipid-associated protein 3,...	0.03	OrthoFinder output from all 47 species
Zm00001e040997_P002	Zm00001e040997	Probable plastid-lipid-associated protein 2,...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009409	response to cold	IEP	Interproscan
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009534	chloroplast thylakoid	IDA	Interproscan
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
CC	GO:0009579	thylakoid	IDA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009644	response to high light intensity	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IEP	Interproscan
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010109	regulation of photosynthesis	None	Extended
BP	GO:0010205	photoinhibition	IMP	Interproscan
CC	GO:0010287	plastoglobule	IDA	Interproscan
CC	GO:0010319	stromule	IDA	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
CC	GO:0019867	outer membrane	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
CC	GO:0031968	organelle outer membrane	None	Extended
CC	GO:0031976	plastid thylakoid	None	Extended
CC	GO:0031977	thylakoid lumen	IDA	Interproscan
BP	GO:0033993	response to lipid	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042548	regulation of photosynthesis, light reaction	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
BP	GO:0043155	negative regulation of photosynthesis, light reaction	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043467	regulation of generation of precursor metabolites and energy	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1905156	negative regulation of photosynthesis	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006843	PAP/fibrillin_dom	93	308

External Links

No external refs found!

AT4G04020 (FIB)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation