AT4G03000


Description : RING/U-box superfamily protein


Gene families : OG0001288 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001288_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G03000

Target Alias Description ECC score Gene Family Method Actions
Ceric.16G079400.1 Ceric.16G079400 E3 ubiquitin ligase *(PIR) & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g09106 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44095 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g22013 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07849 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13607 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08366 No alias E3 ubiquiTin ligase *(PIR) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12679 No alias E3 ubiquiTin ligase *(PIR) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14761 No alias E3 ubiquiTin ligase *(PIR) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Type GO Term Name Evidence Source
CC GO:0005829 cytosol IEP HCCA
BP GO:0009658 chloroplast organization IEP HCCA
BP GO:0009902 chloroplast relocation IEP HCCA
BP GO:0009903 chloroplast avoidance movement IEP HCCA
BP GO:0009904 chloroplast accumulation movement IEP HCCA
BP GO:0019750 chloroplast localization IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0051644 plastid localization IEP HCCA
BP GO:0051656 establishment of organelle localization IEP HCCA
BP GO:0051667 establishment of plastid localization IEP HCCA

No InterPro domains available for this sequence

No external refs found!