AT4G02780 (CPS, ATCPS1, ABC33, CPS1, GA1)

Aliases : CPS, ATCPS1, ABC33, CPS1, GA1

Description : Terpenoid cyclases/Protein prenyltransferases superfamily protein

Gene families : OG0000661 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000661_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G02780
Cluster	HCCA: Cluster_236

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00032p00213840	KS, KS1, ATKS1,...	Phytohormones.gibberellin.synthesis.ent-kaurene synthase	0.07	OrthoFinder output from all 47 species
LOC_Os02g36264.1	KS, KS1, ATKS1,...	ent-kaurene synthase	0.04	OrthoFinder output from all 47 species
Lfl_g30809	CPS, ATCPS1,...	EC_5.5 intramolecular lyase & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IDA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009685	gibberellin metabolic process	None	Extended
BP	GO:0009686	gibberellin biosynthetic process	IDA	Interproscan
BP	GO:0009686	gibberellin biosynthetic process	IMP	Interproscan
BP	GO:0009740	gibberellic acid mediated signaling pathway	TAS	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
MF	GO:0009905	ent-copalyl diphosphate synthase activity	IDA	Interproscan
MF	GO:0009905	ent-copalyl diphosphate synthase activity	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010476	gibberellin mediated signaling pathway	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016101	diterpenoid metabolic process	None	Extended
BP	GO:0016102	diterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016872	intramolecular lyase activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005630	Terpene_synthase_metal-bd	522	596
IPR001906	Terpene_synth_N	272	478

External Links

No external refs found!

AT4G02780 (CPS, ATCPS1, ABC33, CPS1, GA1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation