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  5. AT4G02620

AT4G02620


Description : vacuolar ATPase subunit F family protein


Gene families : OG0003775 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003775_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G02620

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00093490 evm_27.TU.AmTr_v1... Solute transport.primary active transport.V-type ATPase... 0.03 OrthoFinder output from all 47 species
Ala_g04376 No alias subunit F of V-type ATPase peripheral V1 subcomplex &... 0.02 OrthoFinder output from all 47 species
Aop_g02660 No alias subunit F of V-type ATPase peripheral V1 subcomplex &... 0.07 OrthoFinder output from all 47 species
Cba_g49935 No alias subunit F of V-type ATPase peripheral V1 subcomplex &... 0.02 OrthoFinder output from all 47 species
Ceric.02G010300.1 Ceric.02G010300 subunit F of V-type ATPase peripheral V1 subcomplex &... 0.04 OrthoFinder output from all 47 species
Cre10.g446550 No alias Solute transport.primary active transport.V-type ATPase... 0.02 OrthoFinder output from all 47 species
Dac_g00098 No alias subunit F of V-type ATPase peripheral V1 subcomplex &... 0.03 OrthoFinder output from all 47 species
Dcu_g00075 No alias subunit F of V-type ATPase peripheral V1 subcomplex &... 0.06 OrthoFinder output from all 47 species
LOC_Os02g57854.1 LOC_Os02g57854 subunit F of V-type ATPase peripheral V1 subcomplex 0.07 OrthoFinder output from all 47 species
Lfl_g05835 No alias subunit F of V-type ATPase peripheral V1 subcomplex &... 0.03 OrthoFinder output from all 47 species
Mp8g16100.1 No alias subunit F of V-type ATPase peripheral V1 subcomplex 0.08 OrthoFinder output from all 47 species
Msp_g05173 No alias subunit F of V-type ATPase peripheral V1 subcomplex &... 0.03 OrthoFinder output from all 47 species
Pir_g09104 No alias subunit F of V-type ATPase peripheral V1 subcomplex &... 0.04 OrthoFinder output from all 47 species
Pp3c25_8080V3.1 Pp3c25_8080 vacuolar ATPase subunit F family protein 0.04 OrthoFinder output from all 47 species
Ppi_g15870 No alias subunit F of V-type ATPase peripheral V1 subcomplex &... 0.03 OrthoFinder output from all 47 species
Smo73696 No alias Solute transport.primary active transport.V-type ATPase... 0.04 OrthoFinder output from all 47 species
Solyc02g068450.3.1 Solyc02g068450 subunit F of V-type ATPase peripheral V1 subcomplex 0.07 OrthoFinder output from all 47 species
Spa_g19313 No alias subunit F of V-type ATPase peripheral V1 subcomplex &... 0.06 OrthoFinder output from all 47 species
Tin_g17206 No alias subunit F of V-type ATPase peripheral V1 subcomplex &... 0.02 OrthoFinder output from all 47 species
Zm00001e035810_P001 Zm00001e035810 subunit F of V-type ATPase peripheral V1 subcomplex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005773 vacuole IDA Interproscan
CC GO:0005774 vacuolar membrane IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000060 obsolete protein import into nucleus, translocation IEP HCCA
MF GO:0000104 succinate dehydrogenase activity IEP HCCA
BP GO:0001666 response to hypoxia IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005753 mitochondrial proton-transporting ATP synthase complex IEP HCCA
BP GO:0006121 mitochondrial electron transport, succinate to ubiquinone IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0009853 photorespiration IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
CC GO:0022626 cytosolic ribosome IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0035966 response to topologically incorrect protein IEP HCCA
BP GO:0036293 response to decreased oxygen levels IEP HCCA
BP GO:0043094 cellular metabolic compound salvage IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
CC GO:0045259 proton-transporting ATP synthase complex IEP HCCA
CC GO:0045281 succinate dehydrogenase complex IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051788 response to misfolded protein IEP HCCA
BP GO:0070482 response to oxygen levels IEP HCCA
BP GO:0080129 proteasome core complex assembly IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR008218 ATPase_V1-cplx_f_g_su 15 116
No external refs found!