AT4G01850 (SAM2, MAT2, AtSAM2, SAM-2)

Aliases : SAM2, MAT2, AtSAM2, SAM-2

Description : S-adenosylmethionine synthetase 2

Gene families : OG0000645 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000645_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G01850
Cluster	HCCA: Cluster_140

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00073480	SAM2, MAT2,...	Coenzyme metabolism.S-adenosyl methionine (SAM)...	0.05	OrthoFinder output from all 47 species
Adi_g109109	SAMS3, MTO3, MAT4	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Aev_g06470	SAMS3, MTO3, MAT4	EC_2.5 transferase transferring alkyl or aryl group,...	0.04	OrthoFinder output from all 47 species
Aev_g18138	SAMS3, MTO3, MAT4	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Aev_g31185	SAMS3, MTO3, MAT4	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Aev_g43690	SAMS3, MTO3, MAT4	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Als_g38580	SAMS3, MTO3, MAT4	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Als_g49765	MAT1, AtSAM1, SAM1, SAM-1	EC_2.5 transferase transferring alkyl or aryl group,...	0.05	OrthoFinder output from all 47 species
Aop_g12960	MAT3	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Aop_g18643	SAMS3, MTO3, MAT4	EC_2.5 transferase transferring alkyl or aryl group,...	0.06	OrthoFinder output from all 47 species
Aop_g26974	MAT3	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Aop_g68673	MAT3	EC_2.5 transferase transferring alkyl or aryl group,...	0.06	OrthoFinder output from all 47 species
Azfi_s0170.g055593	SAM2, MAT2, AtSAM2, SAM-2	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Cba_g13258	MAT1, AtSAM1, SAM1, SAM-1	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Cba_g50569	MAT1, AtSAM1, SAM1, SAM-1	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Ceric.06G042500.1	SAM2, MAT2,...	EC_2.5 transferase transferring alkyl or aryl group,...	0.06	OrthoFinder output from all 47 species
Ceric.23G071300.1	SAM2, MAT2,...	EC_2.5 transferase transferring alkyl or aryl group,...	0.05	OrthoFinder output from all 47 species
Ceric.23G071400.1	MAT1, AtSAM1,...	EC_2.5 transferase transferring alkyl or aryl group,...	0.07	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001530.4	SAMS3, MTO3, MAT4	Coenzyme metabolism.S-adenosyl methionine (SAM)...	0.01	OrthoFinder output from all 47 species
Cre06.g250200	MAT3	Coenzyme metabolism.S-adenosyl methionine (SAM)...	0.04	OrthoFinder output from all 47 species
Dac_g03733	MAT1, AtSAM1, SAM1, SAM-1	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Dcu_g08107	SAMS3, MTO3, MAT4	EC_2.5 transferase transferring alkyl or aryl group,...	0.06	OrthoFinder output from all 47 species
Dcu_g27683	MAT1, AtSAM1, SAM1, SAM-1	EC_2.5 transferase transferring alkyl or aryl group,...	0.12	OrthoFinder output from all 47 species
Dcu_g46795	MAT1, AtSAM1, SAM1, SAM-1	EC_2.5 transferase transferring alkyl or aryl group,...	0.12	OrthoFinder output from all 47 species
Dde_g12247	MAT1, AtSAM1, SAM1, SAM-1	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Ehy_g04512	MAT1, AtSAM1, SAM1, SAM-1	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
GSVIVT01028205001	SAM2, MAT2, AtSAM2, SAM-2	Coenzyme metabolism.S-adenosyl methionine (SAM)...	0.13	OrthoFinder output from all 47 species
GSVIVT01031492001	MAT3	S-adenosylmethionine synthase 3 OS=Vitis vinifera	0.04	OrthoFinder output from all 47 species
Gb_05010	SAM2, MAT2, AtSAM2, SAM-2	S-adenosyl methionine synthetase	0.03	OrthoFinder output from all 47 species
Gb_29408	SAMS3, MTO3, MAT4	S-adenosyl methionine synthetase	0.1	OrthoFinder output from all 47 species
Gb_29410	SAMS3, MTO3, MAT4	S-adenosyl methionine synthetase	0.16	OrthoFinder output from all 47 species
Gb_29411	SAMS3, MTO3, MAT4	S-adenosyl methionine synthetase	0.12	OrthoFinder output from all 47 species
LOC_Os05g04510.1	MAT1, AtSAM1,...	S-adenosyl methionine synthetase	0.13	OrthoFinder output from all 47 species
Len_g18504	MAT3	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Lfl_g02008	MAT1, AtSAM1, SAM1, SAM-1	EC_2.5 transferase transferring alkyl or aryl group,...	0.05	OrthoFinder output from all 47 species
Lfl_g18263	SAMS3, MTO3, MAT4	EC_2.5 transferase transferring alkyl or aryl group,...	0.04	OrthoFinder output from all 47 species
Lfl_g34452	MAT1, AtSAM1, SAM1, SAM-1	EC_2.5 transferase transferring alkyl or aryl group,...	0.06	OrthoFinder output from all 47 species
MA_197296g0010	SAMS3, MTO3, MAT4	S-adenosyl methionine synthetase	0.06	OrthoFinder output from all 47 species
Msp_g10534	MAT3	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Nbi_g03548	MAT3	EC_2.5 transferase transferring alkyl or aryl group,...	0.09	OrthoFinder output from all 47 species
Pir_g60386	MAT3	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Ppi_g07426	MAT1, AtSAM1, SAM1, SAM-1	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Smo155092	SAM2, MAT2, AtSAM2, SAM-2	Coenzyme metabolism.S-adenosyl methionine (SAM)...	0.07	OrthoFinder output from all 47 species
Smo168213	SAM2, MAT2, AtSAM2, SAM-2	Coenzyme metabolism.S-adenosyl methionine (SAM)...	0.06	OrthoFinder output from all 47 species
Solyc09g008280.2.1	MAT3, Solyc09g008280	S-adenosyl methionine synthetase	0.07	OrthoFinder output from all 47 species
Solyc10g083970.1.1	MAT3, Solyc10g083970	S-adenosyl methionine synthetase	0.02	OrthoFinder output from all 47 species
Spa_g14825	MAT1, AtSAM1, SAM1, SAM-1	EC_2.5 transferase transferring alkyl or aryl group,...	0.06	OrthoFinder output from all 47 species
Spa_g14826	SAM2, MAT2, AtSAM2, SAM-2	EC_2.5 transferase transferring alkyl or aryl group,...	0.06	OrthoFinder output from all 47 species
Spa_g30359	MAT3	EC_2.5 transferase transferring alkyl or aryl group,...	0.08	OrthoFinder output from all 47 species
Spa_g40090	SAM2, MAT2, AtSAM2, SAM-2	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Spa_g51507	MAT1, AtSAM1, SAM1, SAM-1	EC_2.5 transferase transferring alkyl or aryl group,...	0.04	OrthoFinder output from all 47 species
Tin_g02572	MAT3	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Tin_g03249	SAM2, MAT2, AtSAM2, SAM-2	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Zm00001e026226_P001	MAT1, AtSAM1,...	S-adenosyl methionine synthetase	0.06	OrthoFinder output from all 47 species
Zm00001e040353_P003	SAM2, MAT2,...	S-adenosyl methionine synthetase	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004478	methionine adenosyltransferase activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005507	copper ion binding	IDA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	IDA	Interproscan
CC	GO:0005730	nucleolus	IDA	Interproscan
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006556	S-adenosylmethionine biosynthetic process	ISS	Interproscan
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009506	plasmodesma	IDA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009735	response to cytokinin	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010039	response to iron ion	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
CC	GO:0031982	vesicle	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043230	extracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0046500	S-adenosylmethionine metabolic process	None	Extended
BP	GO:0046686	response to cadmium ion	RCA	Interproscan
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
CC	GO:0065010	extracellular membrane-bounded organelle	None	Extended
CC	GO:0070062	extracellular exosome	IDA	Interproscan
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071241	cellular response to inorganic substance	None	Extended
BP	GO:0071248	cellular response to metal ion	None	Extended
BP	GO:0071281	cellular response to iron ion	IEP	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1903561	extracellular vesicle	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	HCCA
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	HCCA
MF	GO:0003871	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity	IEP	HCCA
MF	GO:0005351	carbohydrate:proton symporter activity	IEP	HCCA
MF	GO:0005402	carbohydrate:monoatomic cation symporter activity	IEP	HCCA
CC	GO:0005777	peroxisome	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0006094	gluconeogenesis	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006534	cysteine metabolic process	IEP	HCCA
BP	GO:0006555	methionine metabolic process	IEP	HCCA
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	HCCA
BP	GO:0006576	biogenic amine metabolic process	IEP	HCCA
BP	GO:0006595	polyamine metabolic process	IEP	HCCA
BP	GO:0006598	polyamine catabolic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0006816	calcium ion transport	IEP	HCCA
BP	GO:0006833	water transport	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007030	Golgi organization	IEP	HCCA
BP	GO:0007033	vacuole organization	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008172	S-methyltransferase activity	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
MF	GO:0008705	methionine synthase activity	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	HCCA
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009086	methionine biosynthetic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
BP	GO:0009310	amine catabolic process	IEP	HCCA
BP	GO:0009651	response to salt stress	IEP	HCCA
BP	GO:0009692	ethylene metabolic process	IEP	HCCA
BP	GO:0009693	ethylene biosynthetic process	IEP	HCCA
BP	GO:0009698	phenylpropanoid metabolic process	IEP	HCCA
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	HCCA
BP	GO:0009804	coumarin metabolic process	IEP	HCCA
BP	GO:0009805	coumarin biosynthetic process	IEP	HCCA
BP	GO:0009806	lignan metabolic process	IEP	HCCA
BP	GO:0009807	lignan biosynthetic process	IEP	HCCA
BP	GO:0010043	response to zinc ion	IEP	HCCA
MF	GO:0010283	pinoresinol reductase activity	IEP	HCCA
BP	GO:0010410	hemicellulose metabolic process	IEP	HCCA
BP	GO:0010413	glucuronoxylan metabolic process	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015144	carbohydrate transmembrane transporter activity	IEP	HCCA
MF	GO:0015293	symporter activity	IEP	HCCA
MF	GO:0015294	solute:monoatomic cation symporter activity	IEP	HCCA
MF	GO:0015295	solute:proton symporter activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
BP	GO:0019319	hexose biosynthetic process	IEP	HCCA
BP	GO:0019344	cysteine biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019748	secondary metabolic process	IEP	HCCA
BP	GO:0042044	fluid transport	IEP	HCCA
MF	GO:0042084	5-methyltetrahydrofolate-dependent methyltransferase activity	IEP	HCCA
MF	GO:0042085	5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity	IEP	HCCA
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	HCCA
BP	GO:0042402	cellular biogenic amine catabolic process	IEP	HCCA
CC	GO:0042579	microbody	IEP	HCCA
BP	GO:0043449	cellular alkene metabolic process	IEP	HCCA
BP	GO:0043450	alkene biosynthetic process	IEP	HCCA
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	HCCA
BP	GO:0045491	xylan metabolic process	IEP	HCCA
BP	GO:0045492	xylan biosynthetic process	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046364	monosaccharide biosynthetic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	HCCA
BP	GO:0070592	cell wall polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0120251	hydrocarbon biosynthetic process	IEP	HCCA
BP	GO:0120252	hydrocarbon metabolic process	IEP	HCCA
BP	GO:0120254	olefinic compound metabolic process	IEP	HCCA
BP	GO:0120255	olefinic compound biosynthetic process	IEP	HCCA
BP	GO:1900673	olefin metabolic process	IEP	HCCA
BP	GO:1900674	olefin biosynthetic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022630	S-AdoMet_synt_C	240	381
IPR022629	S-AdoMet_synt_central	118	238
IPR022628	S-AdoMet_synt_N	4	101

External Links

No external refs found!

AT4G01850 (SAM2, MAT2, AtSAM2, SAM-2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation