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  5. AT4G01500

AT4G01500 (NGA4)


Aliases : NGA4

Description : AP2/B3-like transcriptional factor family protein


Gene families : OG0000941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000941_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G01500

Target Alias Description ECC score Gene Family Method Actions
AT1G51120 No alias AP2/B3 transcription factor family protein 0.04 OrthoFinder output from all 47 species
Aop_g20316 TEM1, EDF1 AP2-RAV-type transcription factor *(EDF) & original... 0.01 OrthoFinder output from all 47 species
Ehy_g02670 EDF2, AtRAV2,... AP2-RAV-type transcription factor *(EDF) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os12g06080.1 LOC_Os12g06080 transcription factor (RAV/NGATHA) 0.02 OrthoFinder output from all 47 species
MA_3834g0010 EDF2, AtRAV2,... transcription factor (RAV/NGATHA) 0.02 OrthoFinder output from all 47 species
Solyc12g098460.2.1 Solyc12g098460 AP2/ERF and B3 domain-containing transcription factor... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009908 flower development IMP Interproscan
BP GO:0048366 leaf development IMP Interproscan
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Type GO Term Name Evidence Source
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0009299 mRNA transcription IEP HCCA
CC GO:0019005 SCF ubiquitin ligase complex IEP HCCA
CC GO:0031351 obsolete integral component of plastid membrane IEP HCCA
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 36 121
No external refs found!